⬆️ pre-commit.ci autoupdate (#135)

.pre-commit-config.yaml

@@ -9,7 +9,7 @@ fail_fast: false
 
 repos:
 - repo: https://github.com/astral-sh/ruff-pre-commit
-  rev: v0.8.6
+  rev: v0.9.1
   hooks:
   - id: ruff
     args: [--fix]
@@ -39,7 +39,7 @@ repos:
     - --no-sort
 
 - repo: https://github.com/python-poetry/poetry
-  rev: 2.0.0
+  rev: 2.0.1
   hooks:
   - id: poetry-check
   - id: poetry-lock

src/cpac/__main__.py

@@ -353,10 +353,9 @@ def main(args):
                 )
             except Exception:  # pragma: no cover
                 raise ValueError(
-                    f"""Something about {[
-                        arg for arg in args.extra_args if
-                        '--data_config_file' in arg
-                    ]} is confusing."""
+                    f"""Something about {
+                        [arg for arg in args.extra_args if "--data_config_file" in arg]
+                    } is confusing."""
                 )
     else:
         args.data_config_file = (

src/cpac/backends/apptainer/apptainer.py

@@ -3,7 +3,7 @@
 from spython import main as spython_main
 from spython.main.base import command
 
-from cpac.backends.platform import PlatformMeta
+from cpac.backends.container_platform import PlatformMeta
 from cpac.backends.singularity import Singularity
 from .spython import get_client, init_command
 

src/cpac/backends/platform.py → src/cpac/backends/container_platform.py

@@ -364,9 +364,7 @@ def _load_logging(self):
                     "  ",
                 )
             )
-            print(
-                f"Logging messages will refer to the {self.platform.name} " "paths.\n"
-            )
+            print(f"Logging messages will refer to the {self.platform.name} paths.\n")
 
     @property
     def platform(self):
@@ -462,7 +460,7 @@ def _set_bindings(self, **kwargs):
                     self._bind_volume(Volume(bind_parts[0]))
                 else:
                     raise SyntaxError(
-                        "I don't know what to do with custom " "binding {}".format(d)
+                        "I don't know what to do with custom binding {}".format(d)
                     )
         for d in ["bids_dir", "output_dir"]:  # pylint: disable=invalid-name
             if d in kwargs and isinstance(kwargs[d], str) and os.path.exists(kwargs[d]):

src/cpac/backends/docker.py

@@ -7,7 +7,7 @@
 from docker.errors import ImageNotFound
 import dockerpty
 
-from cpac.backends.platform import Backend, PlatformMeta
+from cpac.backends.container_platform import Backend, PlatformMeta
 
 
 class Docker(Backend):
@@ -25,7 +25,7 @@ def __init__(self, **kwargs):
             self.client.ping()
         except (docker.errors.APIError, ConnectionError):  # pragma: no cover
             raise OSError(
-                f"Could not connect to {self.platform.name}. " "Is Docker running?"
+                f"Could not connect to {self.platform.name}. Is Docker running?"
             )
 
         image = kwargs["image"] if kwargs.get("image") is not None else "fcpindi/c-pac"

src/cpac/backends/singularity.py

@@ -6,7 +6,7 @@
 from spython.image import Image
 from spython.main import Client
 
-from cpac.backends.platform import Backend, PlatformMeta
+from cpac.backends.container_platform import Backend, PlatformMeta
 
 BINDING_MODES = {"ro": "ro", "w": "rw", "rw": "rw"}
 

src/cpac/utils/bare_wrap.py

@@ -127,7 +127,7 @@ def helpstring(self):
         """Get the helpstring."""
         if self._helpstring is None:
             if not self.supported_python:
-                self._helpstring = f"Extra command '{self.name}' not supported on Python {f'{version_info.major}.{version_info.minor}.{ version_info.micro}'}; supported Python versions range is {self.supported_python_range}.\n\nSee {self.url} for more information and system requirements."
+                self._helpstring = f"Extra command '{self.name}' not supported on Python {f'{version_info.major}.{version_info.minor}.{version_info.micro}'}; supported Python versions range is {self.supported_python_range}.\n\nSee {self.url} for more information and system requirements."
             else:
                 self._helpstring = f"Extra package {self.package} not found. See {self.url} for more information and system requirements, or run `pip install cpac[{self.name}]` to try to install it."
         return self._helpstring.replace(f"usage: {self.command}", f"cpac {self.name}")

src/cpac/utils/utils.py

@@ -196,9 +196,9 @@ def _warn_if_undefined(self):
             warn(
                 f"'{self.mode}' is not a fully-configured permission "
                 f"level in {DIST_NAME}. Configured permission levels are "
-                f"""{", ".join([
-                     f"'{mode}'" for mode in PermissionMode.defined_modes
-                 ])}""",
+                f"""{
+                    ", ".join([f"'{mode}'" for mode in PermissionMode.defined_modes])
+                }""",
                 UserWarning,
             )
             return True