Resolve jacobians from duplicate meshes #4663
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| # This workflow will install Python dependencies, run tests and lint | |
| # with a single version of Python For more information see: | |
| # https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: FFCx CI | |
| on: | |
| push: | |
| branches: | |
| - "**" | |
| tags: | |
| - "v*" | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| include: | |
| - os: windows-2022 | |
| python-version: "3.11" | |
| - os: macos-latest | |
| python-version: "3.12" | |
| steps: | |
| - name: Checkout FFCx | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Export GitHub Actions cache environment variables (Windows) | |
| if: runner.os == 'Windows' | |
| uses: actions/github-script@v7 | |
| with: | |
| script: | | |
| core.exportVariable('ACTIONS_CACHE_URL', process.env.ACTIONS_CACHE_URL || ''); | |
| core.exportVariable('ACTIONS_RUNTIME_TOKEN', process.env.ACTIONS_RUNTIME_TOKEN || ''); | |
| - name: Set up CMake | |
| if: runner.os == 'Windows' | |
| uses: lukka/get-cmake@latest | |
| with: | |
| cmakeVersion: "~3.30.0" | |
| - name: Install dependencies (non-Python, Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get install -y graphviz libgraphviz-dev ninja-build pkg-config | |
| - name: Install dependencies (non-Python, macOS) | |
| if: runner.os == 'macOS' | |
| run: brew install ninja | |
| - name: Install FEniCS dependencies (Python, Unix) | |
| if: runner.os == 'Linux' || runner.os == 'macOS' | |
| run: | | |
| pip install git+https://github.com/FEniCS/ufl.git | |
| pip install git+https://github.com/FEniCS/basix.git | |
| - name: Install FEniCS dependencies (Python, Windows) | |
| if: runner.os == 'Windows' | |
| env: | |
| VCPKG_BINARY_SOURCES: "clear;x-gha,readwrite" | |
| run: | | |
| pip install git+https://github.com/FEniCS/ufl.git | |
| pip install -v git+https://github.com/FEniCS/basix.git --config-settings=cmake.args=-DINSTALL_RUNTIME_DEPENDENCIES=ON --config-settings=cmake.args=-DCMAKE_TOOLCHAIN_FILE=C:/vcpkg/scripts/buildsystems/vcpkg.cmake | |
| - name: Install FFCx (Linux, with optional dependencies) | |
| if: runner.os == 'Linux' | |
| run: pip install .[ci,optional] | |
| - name: Install FFCx (macOS, Windows) | |
| if: runner.os != 'Linux' | |
| run: pip install .[ci] | |
| - name: Static check with mypy | |
| run: mypy ffcx/ | |
| - name: ruff checks | |
| run: | | |
| ruff check . | |
| ruff format --check . | |
| - name: Run units tests | |
| run: python -m pytest -n auto --cov=ffcx/ --junitxml=junit/test-results-${{ matrix.os }}-${{ matrix.python-version }}.xml test/ | |
| - name: Upload to Coveralls | |
| if: ${{ github.repository == 'FEniCS/ffcx' && github.head_ref == '' && matrix.os == 'ubuntu-latest' && matrix.python-version == '3.12' }} | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| run: coveralls | |
| continue-on-error: true | |
| - name: Upload pytest results | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: pytest-results-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: junit/test-results-${{ matrix.os }}-${{ matrix.python-version }}.xml | |
| # Use always() to always run this step to publish test results | |
| # when there are test failures | |
| if: always() | |
| - name: Setup cl.exe (Windows) | |
| if: runner.os == 'Windows' | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Run FFCx demos | |
| run: | | |
| pytest demo/test_demos.py | |
| - name: Build documentation | |
| run: | | |
| cd doc | |
| make html | |
| - name: Upload documentation artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: doc-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: doc/build/html/ | |
| retention-days: 2 | |
| if-no-files-found: error | |
| - name: Checkout FEniCS/docs | |
| if: ${{ github.repository == 'FEniCS/ffcx' && ( github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/') ) && runner.os == 'Linux' && matrix.python-version == 3.12 }} | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: "FEniCS/docs" | |
| path: "docs" | |
| ssh-key: "${{ secrets.SSH_GITHUB_DOCS_PRIVATE_KEY }}" | |
| - name: Set version name | |
| if: ${{ github.repository == 'FEniCS/ffcx' && ( github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/') ) && runner.os == 'Linux' && matrix.python-version == 3.12 }} | |
| run: | | |
| echo "VERSION_NAME=${GITHUB_REF#refs/*/}" >> $GITHUB_ENV | |
| - name: Copy documentation into repository | |
| if: ${{ github.repository == 'FEniCS/ffcx' && ( github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/') ) && runner.os == 'Linux' && matrix.python-version == 3.12 }} | |
| run: | | |
| cd docs | |
| git rm -r --ignore-unmatch ffcx/${{ env.VERSION_NAME }} | |
| mkdir -p ffcx/${{ env.VERSION_NAME }} | |
| cp -r ../doc/build/html/* ffcx/${{ env.VERSION_NAME }} | |
| - name: Commit and push documentation to FEniCS/docs | |
| if: ${{ github.repository == 'FEniCS/ffcx' && ( github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/') ) && runner.os == 'Linux' && matrix.python-version == 3.12 }} | |
| run: | | |
| cd docs | |
| git config --global user.email "fenics@github.com" | |
| git config --global user.name "FEniCS GitHub Actions" | |
| git add --all | |
| git commit --allow-empty -m "Python FEniCS/ffcx@${{ github.sha }}" | |
| git push |