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fix auto-detection
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@FelixKrueger FelixKrueger released this 26 Jul 07:40
· 124 commits to master since this release
0.23.1
73844f4

filter_non_conversion

  • fixed global setting of --paired or --single mode. Auto-detection now works by only looking at the @PG ID:Bismark line of the SAM header.

methylation_consistency

  • Auto-detection now works by only looking at the @PG ID:Bismark line of the SAM header.

coverage2cytosine

  • Swapped the columns for count methylated and count unmethylated for the context summary report to match the header line.
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