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cats-viewer

3d visualizations of whale feeding behavior collected using CATS tags.

Installation

Clone this repo using GitHub tools. The sample data is stored on figshare. From the root directory of the cats-viewer project, download the data using:

download.file("https://ndownloader.figshare.com/files/17625341", "data/bw170813-44/bw170813-44 10Hzprh.csv")

Usage

If you're in RStudio, open server.R or ui.R and use the 'Run App' shortcut button. You can also run the app from the console using:

shiny::runApp()

The sample data is 382 MB, so give it a minute to load. The first plot you'll see is the overall dive profile. Click and drag to select a region to zoom, which will show up in the second plot. Click on a dive to see a 3d rendering with lunges (feeding events) marked in orange. Click on a lunge to see sensor data of the lunge. From top to bottom, these plots are depth, speed, pitch/roll, and the y-axis gyroscope. The last plot is useful for identifying fluke strokes.

Example of cats-viewer in use

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