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remove excess axioms
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@Clare72
Clare72 committed Dec 5, 2023
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Expand Up @@ -16168,8 +16168,6 @@ synonym: "repressed male genital primordium" EXACT [FlyBase:FBrf0037847]
synonym: "RMP" EXACT [FlyBase:FBrf0037847]
synonym: "rmp" EXACT [FlyBase:FBrf0091028]
is_a: FBbt:00005555 ! repressed genital primordium
intersection_of: FBbt:00052053 ! male genital primordium
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: BFO:0000050 FBbt:00001787 ! part_of female genital disc

[Term]
Expand All @@ -16191,8 +16189,6 @@ synonym: "repressed female genital primordium" EXACT [FlyBase:FBrf0037847]
synonym: "RFP" EXACT [FlyBase:FBrf0037847]
synonym: "rfp" EXACT [FlyBase:FBrf0091028]
is_a: FBbt:00005555 ! repressed genital primordium
intersection_of: FBbt:00052052 ! female genital primordium
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: BFO:0000050 FBbt:00001785 ! part_of male genital disc

[Term]
Expand Down Expand Up @@ -72414,8 +72410,6 @@ synonym: "female-specific post-embryonic Ilp7 neuron" BROAD [FlyBase:FBrf0222499
synonym: "female-type Ilp7 neuron" BROAD [FlyBase:FBrf0222499]
xref: VFB:FBbt_00047238
is_a: FBbt:00005123 ! motor neuron
intersection_of: FBbt:00047239 ! adult dorsal posterior Ilp7 neuron
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002215 GO:0061535 ! capable of glutamate secretion, neurotransmission
relationship: RO:0013003 FBbt:00004911 ! sends synaptic output to region oviduct
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
Expand Down Expand Up @@ -108696,8 +108690,6 @@ synonym: "doublesex-expressing posterior Medial Neuron 1 (male)" EXACT []
synonym: "dsx-expressing posterior Medial Neuron 1 (male)" EXACT []
synonym: "dsx-pMN1 (male)" EXACT []
xref: VFB:FBbt_00049941
intersection_of: FBbt:00047646 ! descending neuron of the posterior brain DNp13
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002100 FBbt:00111153 ! has soma location adult posterior brain cell body rind
relationship: RO:0002292 http://flybase.org/reports/FBgn0000504 ! expresses dsx
relationship: RO:0013001 FBbt:00045047 ! has synaptic IO in region adult periesophageal neuropils
Expand All @@ -108717,8 +108709,6 @@ synonym: "doublesex-expressing posterior Medial Neuron 1 (female)" EXACT []
synonym: "dsx-expressing posterior Medial Neuron 1 (female)" EXACT []
synonym: "dsx-pMN1 (female)" EXACT []
xref: VFB:FBbt_00049942
intersection_of: FBbt:00047646 ! descending neuron of the posterior brain DNp13
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0000053 PATO:0000618 ! has characteristic bilateral
relationship: RO:0002100 FBbt:00111153 ! has soma location adult posterior brain cell body rind
relationship: RO:0002101 FBbt:00047535 ! fasciculates with dorsal median tract of dorsal cervical fasciculus
Expand Down Expand Up @@ -109636,8 +109626,6 @@ subset: TL_lineage_clone
synonym: "neuroblast FLAa3 (male)" EXACT [doi:10.1101/2020.06.12.148775]
synonym: "neuroblast FLAa3m" EXACT []
xref: VFB:FBbt_00050009
intersection_of: FBbt:00100556 ! neuroblast BAmas2
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism

[Term]
id: FBbt:00050010
Expand All @@ -109647,8 +109635,6 @@ subset: TL_lineage_clone
synonym: "adult FLAa3 (male) lineage clone" EXACT []
synonym: "adult FLAa3m lineage clone" EXACT []
xref: VFB:FBbt_00050010
is_a: FBbt:00047123 ! adult BAmas2 lineage clone
relationship: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002131 FBbt:00003688 ! overlaps lobe system of mushroom body
relationship: RO:0002131 FBbt:00007054 ! overlaps superior lateral protocerebrum
relationship: RO:0002131 FBbt:00007059 ! overlaps anterior optic tubercle
Expand Down Expand Up @@ -110131,8 +110117,6 @@ def: "." [FlyBase:FBrf0221412, FlyBase:FBrf0221438]
subset: TL_lineage_clone
synonym: "neuroblast SMPad1f" EXACT []
xref: VFB:FBbt_00050041
intersection_of: FBbt:00049463 ! neuroblast SMPad1
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism

[Term]
id: FBbt:00050042
Expand All @@ -110141,9 +110125,7 @@ def: "A clone of neurons in the adult brain, all of which develop from neuroblas
subset: TL_lineage_clone
synonym: "adult SMPad1f lineage clone" EXACT []
xref: VFB:FBbt_00050042
is_a: FBbt:00049464 ! adult SMPad1 lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002131 FBbt:00007053 ! overlaps adult lateral horn
relationship: RO:0002131 FBbt:00007054 ! overlaps superior lateral protocerebrum
relationship: RO:0002131 FBbt:00007055 ! overlaps superior medial protocerebrum
Expand Down Expand Up @@ -111700,8 +111682,6 @@ def: "." [FlyBase:FBrf0221412, FlyBase:FBrf0221438]
subset: TL_lineage_clone
synonym: "neuroblast CREa1f" EXACT []
xref: VFB:FBbt_00050148
intersection_of: FBbt:00049462 ! neuroblast CREa1
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism

[Term]
id: FBbt:00050149
Expand All @@ -111710,9 +111690,7 @@ def: "A clone of neurons in the adult brain, all of which develop from neuroblas
subset: TL_lineage_clone
synonym: "adult CREa1f lineage clone" EXACT []
xref: VFB:FBbt_00050149
is_a: FBbt:00049461 ! adult CREa1 lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002131 FBbt:00003679 ! overlaps fan-shaped body
relationship: RO:0002131 FBbt:00003681 ! overlaps adult lateral accessory lobe
relationship: RO:0002131 FBbt:00003688 ! overlaps lobe system of mushroom body
Expand Down Expand Up @@ -112117,8 +112095,6 @@ subset: TL_lineage_clone
synonym: "neuroblast FLAa3 (female)" EXACT [doi:10.1101/2020.06.12.148775]
synonym: "neuroblast FLAa3f" EXACT []
xref: VFB:FBbt_00050178
intersection_of: FBbt:00100556 ! neuroblast BAmas2
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism

[Term]
id: FBbt:00050179
Expand All @@ -112128,8 +112104,6 @@ subset: TL_lineage_clone
synonym: "adult FLAa3 (female) lineage clone" EXACT [doi:10.1101/2020.06.12.148775]
synonym: "adult FLAa3f lineage clone" EXACT []
xref: VFB:FBbt_00050179
is_a: FBbt:00047123 ! adult BAmas2 lineage clone
relationship: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002202 FBbt:00050178 ! develops from neuroblast BAmas2 (female)

[Term]
Expand Down Expand Up @@ -113036,8 +113010,6 @@ def: "." [FlyBase:FBrf0221412]
subset: TL_lineage_clone
synonym: "neuroblast SMPad1m" EXACT []
xref: VFB:FBbt_00050243
intersection_of: FBbt:00049463 ! neuroblast SMPad1
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism

[Term]
id: FBbt:00050244
Expand All @@ -113046,9 +113018,7 @@ def: "A clone of neurons in the adult brain, all of which develop from neuroblas
subset: TL_lineage_clone
synonym: "adult SMPad1m lineage clone" EXACT []
xref: VFB:FBbt_00050244
is_a: FBbt:00049464 ! adult SMPad1 lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002131 FBbt:00007053 ! overlaps adult lateral horn
relationship: RO:0002131 FBbt:00007054 ! overlaps superior lateral protocerebrum
relationship: RO:0002131 FBbt:00007055 ! overlaps superior medial protocerebrum
Expand All @@ -113073,8 +113043,6 @@ name: neuroblast CREa1 (male)
def: "." [FlyBase:FBrf0221412]
subset: TL_lineage_clone
xref: VFB:FBbt_00050246
intersection_of: FBbt:00049462 ! neuroblast CREa1
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism

[Term]
id: FBbt:00050247
Expand All @@ -113083,9 +113051,7 @@ def: "A clone of neurons in the adult brain, all of which develop from neuroblas
subset: TL_lineage_clone
synonym: "adult CREa1m lineage clone" EXACT []
xref: VFB:FBbt_00050247
is_a: FBbt:00049461 ! adult CREa1 lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002131 FBbt:00003678 ! overlaps ellipsoid body
relationship: RO:0002131 FBbt:00003679 ! overlaps fan-shaped body
relationship: RO:0002131 FBbt:00003681 ! overlaps adult lateral accessory lobe
Expand Down Expand Up @@ -115016,8 +114982,6 @@ name: adult aSP22 (male) descending neuron
def: "Adult aSP22 descending neuron of the male (McKellar et al., 2019). It is similar to the female neuron, with more dense arborization in some areas of the brain, but lacking a branch on the dorsal part of the neuron (McKellar et al., 2019). It is involved in male courtship behavior for the engagement of the female - proboscis extension, followed by abdominal bending, then foreleg lifting (McKellar et al., 2019). Activation also causes simultaneous movement of all legs prior to the engagement sequence (McKellar et al., 2019). It expresses the male isoform of fruitless (McKellar et al., 2019)." [FlyBase:FBrf0241391]
synonym: "aSP22 (male)" EXACT []
xref: VFB:FBbt_00051201
intersection_of: FBbt:00051200 ! adult aSP22 descending neuron
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002216 GO:0008049 ! capable of part of male courtship behavior
relationship: RO:0002292 http://flybase.org/reports/FBgn0004652 ! expresses fru
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
Expand All @@ -115029,8 +114993,6 @@ name: adult aSP22 (female) descending neuron
def: "Adult aSP22 descending neuron of the female (McKellar et al., 2019). It is similar to the male neuron, with less dense arborization in some areas of the brain and an extra branch on the dorsal part of the neuron (McKellar et al., 2019). Its activation elicits proboscis extension and simultaneous movement of all legs (McKellar et al., 2019)." [FlyBase:FBrf0241391]
synonym: "aSP22 (female)" EXACT []
xref: VFB:FBbt_00051202
intersection_of: FBbt:00051200 ! adult aSP22 descending neuron
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
property_value: http://purl.org/dc/terms/date "2021-04-01T11:15:13Z" xsd:dateTime

Expand Down Expand Up @@ -115730,8 +115692,6 @@ id: FBbt:00051253
name: adult doublesex aDN (male) neuron
def: "Adult doublesex aDN neuron of the male (Nojima et al., 2021). Its lateral (input) arbor is mainly restricted to the anterior optic tubercle, where it receives input from LC10a neurons (Nojima et al., 2021). It is involved in approaching and facing the female during courtship (Nojima et al., 2021)." [FlyBase:FBrf0248430]
xref: VFB:FBbt_00051253
intersection_of: FBbt:00047354 ! adult doublesex aDN neuron
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002216 GO:0008049 ! capable of part of male courtship behavior
relationship: RO:0013002 FBbt:00007059 ! receives synaptic input in region anterior optic tubercle
relationship: RO:0013008 FBbt:00111747 ! receives synaptic input from neuron lobula columnar neuron LC10a
Expand All @@ -115743,8 +115703,6 @@ id: FBbt:00051254
name: adult doublesex aDN (female) neuron
def: "Adult doublesex aDN neuron of the female (Nojima et al., 2021). Its lateral (input) neurites are mainly found in the posterior part of the superior lateral protocerebrum, with minor processes in the superior clamp and ventrolateral protocerebrum (Nojima et al., 2021). It receives multimodal sensory information, including inputs from a range of antennal lobe projection neurons (Nojima et al., 2021). It also receives substantial input from the oviposition excitatory and inhibitory neurons and is involved in egg-laying site selection (Nojima et al., 2021)." [FlyBase:FBrf0248430]
xref: VFB:FBbt_00051254
intersection_of: FBbt:00047354 ! adult doublesex aDN neuron
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002216 GO:0018991 ! capable of part of egg-laying behavior
relationship: RO:0013002 FBbt:00007058 ! receives synaptic input in region ventrolateral protocerebrum
relationship: RO:0013002 FBbt:00040046 ! receives synaptic input in region posterior superior lateral protocerebrum
Expand Down Expand Up @@ -127227,8 +127185,6 @@ property_value: http://purl.org/dc/terms/date "2022-01-17T13:04:49Z" xsd:dateTim
id: FBbt:00052055
name: female genital primordium (female)
def: "Female genital primordium of the female genital disc. It expands greatly during larval development and generates most of the female genital structures (Keisman et al., 2001)." [FlyBase:FBrf0040174, FlyBase:FBrf0064788, FlyBase:FBrf0141451]
intersection_of: FBbt:00052052 ! female genital primordium
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: BFO:0000050 FBbt:00001787 ! part_of female genital disc
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
property_value: http://purl.org/dc/terms/date "2022-01-17T13:33:38Z" xsd:dateTime
Expand All @@ -127237,8 +127193,6 @@ property_value: http://purl.org/dc/terms/date "2022-01-17T13:33:38Z" xsd:dateTim
id: FBbt:00052056
name: male genital primordium (male)
def: "Male genital primordium of the male genital disc. It expands greatly during larval development and generates most of the male genital structures (Keisman et al., 2001)." [FlyBase:FBrf0064788, FlyBase:FBrf0141451]
intersection_of: FBbt:00052053 ! male genital primordium
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: BFO:0000050 FBbt:00001785 ! part_of male genital disc
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
property_value: http://purl.org/dc/terms/date "2022-01-17T13:38:45Z" xsd:dateTime
Expand Down Expand Up @@ -132538,8 +132492,6 @@ synonym: "A9 NB5-4 (male)" EXACT []
synonym: "female Dsx+tNB" BROAD [FlyBase:FBrf0243282]
xref: VFB:FBbt_00052514
is_a: FBbt:00048511 ! larval terminal neuroblast
intersection_of: FBbt:00052513 ! abdominal 9 neuroblast NB5-4
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: BFO:0000050 FBbt:00111041 ! part_of larval abdominal 9 neuromere
relationship: RO:0002292 http://flybase.org/reports/FBgn0000504 ! expresses dsx
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
Expand All @@ -132553,8 +132505,6 @@ synonym: "A9 NB5-4 (female)" EXACT []
synonym: "female Dsx+tNB" BROAD [FlyBase:FBrf0243282]
xref: VFB:FBbt_00052515
is_a: FBbt:00048511 ! larval terminal neuroblast
intersection_of: FBbt:00052513 ! abdominal 9 neuroblast NB5-4
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: BFO:0000050 FBbt:00111041 ! part_of larval abdominal 9 neuromere
relationship: RO:0002292 http://flybase.org/reports/FBgn0000504 ! expresses dsx
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1373-1705
Expand Down Expand Up @@ -167401,9 +167351,7 @@ def: "A clone of neurons in the adult female brain that expresses fruitless, who
comment: These clones were obtained by MARCM using a fru-GAL4 driver (FBal0276838), with clones induced at the first instar larval stage (Cachero et al., 2010).
synonym: "adult female fruitless aSP5 clone" EXACT [FlyBase:FBrf0221438]
xref: VFB:FBbt_00110458
is_a: FBbt:00051306 ! adult fruitless aSP-f lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0002131 FBbt:00007058 ! overlaps ventrolateral protocerebrum
relationship: RO:0002131 FBbt:00045030 ! overlaps superior neuropils
relationship: RO:0002292 http://flybase.org/reports/FBgn0004652 ! expresses fru
Expand Down Expand Up @@ -167434,8 +167382,6 @@ synonym: "female aSP3b2 clone" EXACT [FlyBase:FBrf0205974]
synonym: "female aSP6 clone" EXACT [FlyBase:FBrf0211884]
synonym: "female fru-aSP3 clone" RELATED [FlyBase:FBrf0128543]
xref: VFB:FBbt_00110460
intersection_of: FBbt:00049715 ! adult fruitless aSP-g lineage clone
intersection_of: BFO:0000050 FBbt:00007011 ! part_of female organism
relationship: RO:0000053 PATO:0000618 ! has characteristic bilateral
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5948-3092
property_value: http://purl.org/dc/terms/date "2013-05-23T03:45:07Z" xsd:dateTime
Expand Down Expand Up @@ -169307,9 +169253,7 @@ def: "A clone of neurons in the adult male brain that expresses fruitless, whose
comment: These clones were obtained by MARCM using a fru-GAL4 driver (FBal0276838), with clones induced at the first instar larval stage (Cachero et al., 2010).
synonym: "adult male fruitless aSP5 clone" EXACT [FlyBase:FBrf0211884]
xref: VFB:FBbt_00110598
is_a: FBbt:00051306 ! adult fruitless aSP-f lineage clone
relationship: BFO:0000050 FBbt:00003624 ! part_of adult brain
relationship: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0002131 FBbt:00007058 ! overlaps ventrolateral protocerebrum
relationship: RO:0002131 FBbt:00040037 ! overlaps inferior neuropils
relationship: RO:0002131 FBbt:00045030 ! overlaps superior neuropils
Expand Down Expand Up @@ -169341,8 +169285,6 @@ synonym: "male aSP3b2 clone" EXACT [FlyBase:FBrf0205974]
synonym: "male aSP6 clone" EXACT [FlyBase:FBrf0211884]
synonym: "male fru-aSP3 clone" BROAD [FlyBase:FBrf0128543]
xref: VFB:FBbt_00110600
intersection_of: FBbt:00049715 ! adult fruitless aSP-g lineage clone
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0000053 PATO:0000618 ! has characteristic bilateral
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5948-3092
property_value: http://purl.org/dc/terms/date "2013-07-25T20:02:17Z" xsd:dateTime
Expand Down Expand Up @@ -178609,8 +178551,6 @@ subset: cur
synonym: "adult male Ilp7 posterior abdominal ganglion neuron" EXACT []
xref: VFB:FBbt_00111305
is_a: FBbt:00110663 ! serotonergic abdominal giant (male) neuron
intersection_of: FBbt:00047239 ! adult dorsal posterior Ilp7 neuron
intersection_of: BFO:0000050 FBbt:00007004 ! part_of male organism
relationship: RO:0013003 FBbt:00004958 ! sends synaptic output to region seminal vesicle
property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5948-3092
property_value: http://purl.org/dc/terms/date "2015-11-28T15:44:20Z" xsd:dateTime
Expand Down

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