Merge pull request #1873 from FlyBase/release_2024-06-13

Release 2024-06-13
FlyBase · Jun 13, 2024 · ea58c9b · ea58c9b
2 parents 41fcf83 + fc8c1b9
commit ea58c9b
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Showing 30 changed files with 428,872 additions and 198,397 deletions.
diff --git a/.github/workflows/qc.yml b/.github/workflows/qc.yml
@@ -19,7 +19,7 @@ jobs:
   ontology_qc:
     # The type of runner that the job will run on
     runs-on: ubuntu-latest
-    container: obolibrary/odkfull:v1.5
+    container: obolibrary/odkfull:v1.5.1
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:

diff --git a/fbbt.obo b/fbbt.obo
diff --git a/fbbt.sssom.tsv b/fbbt.sssom.tsv
@@ -10,7 +10,7 @@
 #  - "ORCID:0000-0002-6095-8718"
 #license: "https://creativecommons.org/licenses/by/4.0/"
 #subject_source: "obo:fbbt.owl"
-#mapping_date: "2024-04-24"
+#mapping_date: "2024-05-31"
 subject_id	subject_label	predicate_id	object_id	mapping_justification	object_source
 FBbt:00000001	organism	semapv:crossSpeciesExactMatch	UBERON:0000468	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00000002	tagma	semapv:crossSpeciesExactMatch	UBERON:6000002	semapv:ManualMappingCuration	obo:uberon.owl
@@ -217,7 +217,6 @@ FBbt:00004551	adult external thorax	semapv:crossSpeciesExactMatch	UBERON:6004551
 FBbt:00004552	tergum	semapv:crossSpeciesExactMatch	UBERON:6004552	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00004557	sternum	semapv:crossSpeciesExactMatch	UBERON:0003130	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00004578	adult external mesothorax	semapv:crossSpeciesExactMatch	UBERON:6004578	semapv:ManualMappingCuration	obo:uberon.owl
-FBbt:00004579	dorsal mesothorax	semapv:crossSpeciesExactMatch	UBERON:6004579	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00004580	mesothoracic tergum	semapv:crossSpeciesExactMatch	UBERON:6004580	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00004640	leg	semapv:crossSpeciesExactMatch	UBERON:0005895	semapv:ManualMappingCuration	obo:uberon.owl
 FBbt:00004642	tibia	semapv:crossSpeciesExactMatch	UBERON:0003131	semapv:ManualMappingCuration	obo:uberon.owl

diff --git a/fly_anatomy.obo b/fly_anatomy.obo
diff --git a/src/ontology/Makefile b/src/ontology/Makefile
@@ -1,7 +1,7 @@
 # ----------------------------------------
 # Makefile for fbbt
 # Generated using ontology-development-kit
-# ODK Version: v1.5
+# ODK Version: v1.5.1
 # ----------------------------------------
 # IMPORTANT: DO NOT EDIT THIS FILE. To override default make goals, use fbbt.Makefile instead
 
@@ -45,8 +45,8 @@ REPORT_LABEL =              -l true
 REPORT_PROFILE_OPTS =       
 OBO_FORMAT_OPTIONS =        
 SPARQL_VALIDATION_CHECKS =  owldef-self-reference iri-range label-with-iri multiple-replaced_by dc-properties 
-SPARQL_EXPORTS =            basic-report edges xrefs obsoletes synonyms 
-ODK_VERSION_MAKEFILE =      v1.5
+SPARQL_EXPORTS =            basic-report class-count-by-prefix edges xrefs obsoletes synonyms 
+ODK_VERSION_MAKEFILE =      v1.5.1
 
 TODAY ?=                    $(shell date +%Y-%m-%d)
 OBODATE ?=                  $(shell date +'%d:%m:%Y %H:%M')