Typo correction

FrederickHuangLin · Jun 28, 2022 · edf5665 · edf5665
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Showing 19 changed files with 22 additions and 26 deletions.
diff --git a/images/main/body_sites_secom.pdf b/images/main/body_sites_secom.pdf
diff --git a/images/main/nomic_corr_family.pdf b/images/main/nomic_corr_family.pdf
diff --git a/images/main/nomic_count_family.jpeg b/images/main/nomic_count_family.jpeg
diff --git a/images/main/nomic_count_family.pdf b/images/main/nomic_count_family.pdf
diff --git a/images/supp/supp_body_sites_prop.pdf b/images/supp/supp_body_sites_prop.pdf
diff --git a/images/supp/supp_body_sites_sample.jpeg b/images/supp/supp_body_sites_sample.jpeg
diff --git a/images/supp/supp_body_sites_sample.pdf b/images/supp/supp_body_sites_sample.pdf
diff --git a/images/supp/supp_body_sites_se.pdf b/images/supp/supp_body_sites_se.pdf
diff --git a/images/supp/supp_body_sites_sparcc.pdf b/images/supp/supp_body_sites_sparcc.pdf
diff --git a/images/supp/supp_nomic_count_family.jpeg b/images/supp/supp_nomic_count_family.jpeg
diff --git a/images/supp/supp_nomic_count_family.pdf b/images/supp/supp_nomic_count_family.pdf
diff --git a/images/supp/supp_nomic_count_phylum.pdf b/images/supp/supp_nomic_count_phylum.pdf
diff --git a/images/supp/supp_nomic_sparcc.pdf b/images/supp/supp_nomic_sparcc.pdf
diff --git a/images/supp/supp_nonlinear_example2.jpeg → images/supp/supp_nonlinear_example.jpeg b/images/supp/supp_nonlinear_example2.jpeg → images/supp/supp_nonlinear_example.jpeg
diff --git a/images/supp/supp_nonlinear_example2.pdf → images/supp/supp_nonlinear_example.pdf b/images/supp/supp_nonlinear_example2.pdf → images/supp/supp_nonlinear_example.pdf
diff --git a/programs/03_nomic.Rmd b/programs/03_nomic.Rmd
@@ -794,9 +794,9 @@ p_abn = p_abn +
 p_combine = ggarrange(p_abn, p_rel, nrow = 2,
                       heights = c(1, 1.5), labels = c("a", "b"))
 
-ggsave(plot = p_combine, "../images/supp/supp_nomic_count_family.pdf", 
+ggsave(plot = p_combine, "../images/main/nomic_count_family.pdf", 
        height = 8, width = 10)   
-ggsave(plot = p_combine, "../images/supp/supp_nomic_count_family.jpeg", 
+ggsave(plot = p_combine, "../images/main/nomic_count_family.jpeg", 
        height = 8, width = 10, dpi = 300)
 ```
 
@@ -828,8 +828,8 @@ scatter_eg = df_eg %>%
   theme_bw()
   
 scatter_eg
-ggsave(plot = scatter_eg, "../images/supp/supp_nonlinear_example2.pdf", height = 5, width = 6.25)
-ggsave(plot = scatter_eg, "../images/supp/supp_nonlinear_example2.jpeg", height = 5, width = 6.25, dpi = 300)
+ggsave(plot = scatter_eg, "../images/supp/supp_nonlinear_example.pdf", height = 5, width = 6.25)
+ggsave(plot = scatter_eg, "../images/supp/supp_nonlinear_example.jpeg", height = 5, width = 6.25, dpi = 300)
 ```
 
 # 5. SparCC results {.tabset}

diff --git a/programs/03_nomic.html b/programs/03_nomic.html
diff --git a/programs/04_forehead_palm.Rmd b/programs/04_forehead_palm.Rmd
@@ -676,8 +676,6 @@ heat_sample = df_sample %>%
         axis.ticks = element_blank()) +
   coord_fixed()
 heat_sample
-ggsave(plot = heat_sample, "../images/supp/supp_body_sites_sample.pdf", height = 6, width = 6)
-ggsave(plot = heat_sample, "../images/supp/supp_body_sites_sample.jpeg", height = 6, width = 6, dpi = 300)
 ```
 
 ## 4.2 Proportionality {.tabset}

diff --git a/programs/04_forehead_palm.html b/programs/04_forehead_palm.html