This repository contains the code for the paper:

Linking genetic markers and crop model parameters using neural networks to enhance Genomic Prediction of integrative traits Florian Larue , Lauriane Rouan , David Pot , Jean-François Rami , Delphine Luquet and Grégory Beurier * Submitted to Frontier in Plant Science

It contains the data, notebooks to launch the analysis and previous results. It requires the following python libraries: tensorflow, scikit-learn, scipy. It requires the following R libraries: caret, glmnet, BGLR.

The python code is based on the project: https://github.com/GBeurier/genetic_x_model