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update classifier and dependencies
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tony-kuo committed Nov 19, 2024
1 parent 3f5a68a commit 349544f
Showing 1 changed file with 2 additions and 8 deletions.
10 changes: 2 additions & 8 deletions setup.cfg
Original file line number Diff line number Diff line change
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[metadata]
name = scimilarity
version = 0.1.0
description = Single cell embedding into latent space and retrieving with kNN.
author = Graham Heimberg, Tony Kuo, Nathaniel Diamant, Omar Salem, Héctor Corrada Bravo, Jason A. Vander Heiden
author_email = heimberg@gene.com
Expand All @@ -23,7 +24,6 @@ platforms = any
# Add here all kinds of additional classifiers as defined under
# https://pypi.org/classifiers/
classifiers =
Development Status :: 3 - Alpha
Intended Audience :: Science/Research
License :: OSI Approved :: Apache Software License
Natural Language :: English
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# new major versions. This works if the required packages follow Semantic Versioning.
# For more information, check out https://semver.org/.
install_requires =
importlib-metadata; python_version<"3.8"
anndata>=0.8.0
captum>=0.5.0
circlify>=0.14.0
hnswlib>=0.8.0
matplotlib>=3.7.3
numpy>=1.24.4
obonet>=1.0.0
pandas>=1.5.3
pyarrow>=15.0.0
pytorch-lightning>=2.0.0
seaborn>=0.13.0
scanpy>=1.9.2
scipy>=1.7.3
tiledb>=0.18.2
torch>=1.10.1
tqdm
zarr>=2.6.1
importlib-metadata; python_version<"3.8"

[options.packages.find]
where = src
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