Merge pull request #18 from lixun910/master

version 0.0.8.post1

.github/workflows/build-publish.yml

@@ -1,6 +1,13 @@
 name: Ubuntu and Mac builds
 
-on: push
+on:
+  # Triggers the workflow on push or pull request events but only for the master branch
+  push:
+    branches: [ master ]
+  pull_request:
+    branches: [ master ]
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
 
 jobs:
 

Development.md

@@ -2,7 +2,14 @@
 
 ## Deployment
 
-
+1. update libgeoda/
+2. ./swig.sh
+3. add test cases in pygeoda
+4. add modules in pygeoda
+5. local dev and test
+6. pr
+
+**deprecated**
 Pygeoda for windows is built using Appveyor (see: appveyor.yml)
 
 NOTE:
@@ -17,6 +24,13 @@ python 3.9.1 msc 1928 visual c++ 2019  msvc14.2  (vs2019)
 
 Pygeoda for Linux and Mac OSX is built using Travis (see .travis.yml)
 
+## Sphinx Doc
+
+1. use venv
+2. pip install -U sphinx
+3. pip install matplotlib
+4. goto docsrc/
+5. make github
 
 ## conda-forge
 

docs/.buildinfo

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: f81dad4fd49662bef891df983718dbfc
+config: c751da21c461f4a565c82a6424ddecea
 tags: 645f666f9bcd5a90fca523b33c5a78b7

docs/_modules/index.html

@@ -7,12 +7,14 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
 
-  <title>Overview: module code &mdash; pygeoda 0.0.8 rc documentation</title>
+  <title>Overview: module code &mdash; pygeoda 0.0.8 documentation</title>
 
 
 
   <link rel="stylesheet" href="../_static/css/theme.css" type="text/css" />
   <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
+  <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
+  <link rel="stylesheet" href="../_static/css/theme.css" type="text/css" />
 
 
 
@@ -31,6 +33,7 @@
 
 
       <script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
+        <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js"></script>
         <script src="../_static/jquery.js"></script>
         <script src="../_static/underscore.js"></script>
         <script src="../_static/doctools.js"></script>
@@ -84,7 +87,7 @@
 
 
 
-              <p class="caption"><span class="caption-text">USER GUIDE</span></p>
+              <p class="caption" role="heading"><span class="caption-text">USER GUIDE</span></p>
 <ul>
 <li class="toctree-l1"><a class="reference internal" href="../intro.html">1. Introduction</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="../intro.html#open-resources">1.1 Open Resources</a></li>
@@ -134,6 +137,7 @@
 <li class="toctree-l2"><a class="reference internal" href="../spatial_auto.html#quantile-lisa">6.8 Quantile LISA</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../spatial_auto.html#multivariate-quantile-lisa">6.9 Multivariate Quantile LISA</a></li>
 <li class="toctree-l2"><a class="reference internal" href="../spatial_auto.html#neighbor-match-test">6.10 Neighbor Match Test</a></li>
+<li class="toctree-l2"><a class="reference internal" href="../spatial_auto.html#bivariate-local-moran">6.11 Bivariate Local Moran</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../spatial_clustering.html">7. Spatial Clustering</a><ul>
@@ -152,6 +156,7 @@
 <li class="toctree-l3"><a class="reference internal" href="../spatial_clustering.html#max-p-simulated-annealing">7.4.3 Max-p Simulated Annealing</a></li>
 </ul>
 </li>
+<li class="toctree-l2"><a class="reference internal" href="../spatial_clustering.html#validation">7.5 Validation</a></li>
 </ul>
 </li>
 <li class="toctree-l1"><a class="reference internal" href="../esda_geopandas.html">ESDA with pygeoda and geopandas</a><ul>
@@ -166,7 +171,7 @@
 </ul>
 </li>
 </ul>
-<p class="caption"><span class="caption-text">API REFERENCE</span></p>
+<p class="caption" role="heading"><span class="caption-text">API REFERENCE</span></p>
 <ul>
 <li class="toctree-l1"><a class="reference internal" href="../api.html">pygeoda API</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="../api.html#pygeoda-i-o">pygeoda (I/O)</a><ul>
@@ -188,6 +193,7 @@
 <li class="toctree-l2"><a class="reference internal" href="../api.html#pygeoda-lisa">pygeoda (LISA)</a><ul>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.lisa.html">pygeoda.lisa</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.local_moran.html">pygeoda.local_moran</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.local_bimoran.html">pygeoda.local_bimoran</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.local_geary.html">pygeoda.local_geary</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.local_multigeary.html">pygeoda.local_multigeary</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.local_joincount.html">pygeoda.local_joincount</a></li>
@@ -212,6 +218,13 @@
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.maxp_greedy.html">pygeoda.maxp_greedy</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.maxp_sa.html">pygeoda.maxp_sa</a></li>
 <li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.maxp_tabu.html">pygeoda.maxp_tabu</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.spatial_validation.html">pygeoda.spatial_validation</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.Fragmentation.html">pygeoda.Fragmentation</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.Diameter.html">pygeoda.Diameter</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.Compactness.html">pygeoda.Compactness</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.JoinCountRatio.html">pygeoda.JoinCountRatio</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.ValidationResult.html">pygeoda.ValidationResult</a></li>
+<li class="toctree-l3"><a class="reference internal" href="../generated/pygeoda.make_spatial.html">pygeoda.make_spatial</a></li>
 </ul>
 </li>
 <li class="toctree-l2"><a class="reference internal" href="../api.html#pygeoda-classify">pygeoda (classify)</a><ul>
@@ -301,6 +314,7 @@ <h1>All modules for which code is available</h1>
 <li><a href="pygeoda/clustering/redcap.html">pygeoda.clustering.redcap</a></li>
 <li><a href="pygeoda/clustering/schc.html">pygeoda.clustering.schc</a></li>
 <li><a href="pygeoda/clustering/skater.html">pygeoda.clustering.skater</a></li>
+<li><a href="pygeoda/clustering/validation.html">pygeoda.clustering.validation</a></li>
 <li><a href="pygeoda/data/transform.html">pygeoda.data.transform</a></li>
 <li><a href="pygeoda/gda.html">pygeoda.gda</a></li>
 <li><a href="pygeoda/sa/geary.html">pygeoda.sa.geary</a></li>