Merge pull request #2 from althonos/main #2
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| name: generate-owl-tag-release | |
| # Controls when the action will run. Triggers the workflow on push or pull request | |
| # events but only for the master branch | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - main | |
| - test-tag | |
| paths: | |
| - 'XLMOD.obo' | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| build: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Extract version from OBO | |
| run: | | |
| CV_VERSION=`grep data-version XLMOD.obo | grep -oP "(\d+.\d+.\d+)"` | |
| echo CV_VERSION=${CV_VERSION} | |
| echo "CV_VERSION=${CV_VERSION}" >> $GITHUB_ENV | |
| - name: Generate OWL and Commit | |
| run: | | |
| docker pull obolibrary/robot:v1.8.1 | |
| # Replace the imports of the UO and PATO ontology .obo files with the equivalent .owl files | |
| cp XLMOD.obo tmp.obo | |
| sed -e "s/pato.obo/pato.owl/g" -e "s/uo.obo/uo.owl/g" -i tmp.obo | |
| docker run --rm -v ${{ github.workspace }}:/work obolibrary/robot:v1.8.1 robot convert -i /work/tmp.obo -o /work/XLMOD.owl --format owl | |
| rm tmp.obo | |
| git config --global user.name 'XLMOD CV Bot' | |
| git config --global user.email 'mobiusklein@users.noreply.github.com' | |
| OWL_CHANGE=`git diff XLMOD.owl` | |
| if [ -z "$OWL_CHANGE" ] | |
| then | |
| echo OWL did not change, aborting | |
| exit 1 | |
| else | |
| echo OWL updated, committing and proceeding to tag | |
| git add XLMOD.owl | |
| git commit -m "Generate OWL file" | |
| git push | |
| fi | |
| - name: GitHub Tag | |
| id: new_tag | |
| uses: mathieudutour/github-tag-action@v5.6 | |
| with: | |
| github_token: ${{ secrets.PSI_MS_CV_GITHUB_TOKEN }} | |
| pre_release_branches: test-tag | |
| custom_tag: ${{ env.CV_VERSION }} | |
| - name: Create a GitHub release | |
| uses: ncipollo/release-action@v1 | |
| with: | |
| tag: v${{ env.CV_VERSION }} | |
| name: Release v${{ env.CV_VERSION }} | |
| body: ${{ steps.new_tag.outputs.changelog }} | |
| artifacts: "XLMOD.obo,XLMOD.owl" | |
| generateReleaseNotes: true | |
| token: ${{ secrets.PSI_MS_CV_GITHUB_TOKEN }} |