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Bump the dev-dependencies group in /symja_android_library with 16 updates #144

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@dependabot dependabot bot commented on behalf of github Mar 11, 2024

Bumps the dev-dependencies group in /symja_android_library with 16 updates:

Package From To
com.fasterxml.jackson.core:jackson-databind 2.16.1 2.16.2
com.fasterxml.jackson.datatype:jackson-datatype-jsr310 2.16.1 2.16.2
io.undertow:undertow-core 2.3.10.Final 2.3.12.Final
io.undertow:undertow-servlet 2.3.10.Final 2.3.12.Final
it.unimi.dsi:fastutil 8.5.12 8.5.13
it.unimi.dsi:fastutil-core 8.5.12 8.5.13
org.biojava:biojava-core 7.0.2 7.1.1
org.biojava:biojava-alignment 7.0.2 7.1.1
org.apache.logging.log4j:log4j-api 2.22.1 2.23.1
org.apache.logging.log4j:log4j-core 2.22.1 2.23.1
org.apache.logging.log4j:log4j-1.2-api 2.22.1 2.23.1
org.apache.logging.log4j:log4j-slf4j-impl 2.22.1 2.23.1
org.apache.arrow:arrow-vector 14.0.2 15.0.1
org.apache.arrow:arrow-memory-netty 14.0.2 15.0.1
org.junit.jupiter:junit-jupiter-engine 5.10.1 5.10.2
org.junit.vintage:junit-vintage-engine 5.10.1 5.10.2

Updates com.fasterxml.jackson.core:jackson-databind from 2.16.1 to 2.16.2

Commits

Updates com.fasterxml.jackson.datatype:jackson-datatype-jsr310 from 2.16.1 to 2.16.2

Updates io.undertow:undertow-core from 2.3.10.Final to 2.3.12.Final

Commits

Updates io.undertow:undertow-servlet from 2.3.10.Final to 2.3.12.Final

Commits

Updates it.unimi.dsi:fastutil from 8.5.12 to 8.5.13

Changelog

Sourced from it.unimi.dsi:fastutil's changelog.

8.5.13

  • Thanks to Chanoch Goldfeder for fixing a number of bugs in ImmutableList.

  • Thanks to Barak Ugav for implementing a faster ArrayList.removeIf() and fixing a bug in back().

Commits

Updates it.unimi.dsi:fastutil-core from 8.5.12 to 8.5.13

Changelog

Sourced from it.unimi.dsi:fastutil-core's changelog.

8.5.13

  • Thanks to Chanoch Goldfeder for fixing a number of bugs in ImmutableList.

  • Thanks to Barak Ugav for implementing a faster ArrayList.removeIf() and fixing a bug in back().

Commits

Updates org.biojava:biojava-core from 7.0.2 to 7.1.1

Release notes

Sourced from org.biojava:biojava-core's releases.

BioJava 7.1.1

Fixed

  • Now mmCIF files that have no author fields in atom_site can be read (e.g. from PyMol or ESMAtlas) #775 #1083
  • No evaluations of arguments in debug level log statements #1086 #789

Removed

  • Minor removal from biojava-core: FileDownloadUtils::copy, replaced by Files::copy

BioJava 7.1.0

Added

  • Class FastaStreamer to read FASTA-formatted files using Java streams

Fixed

  • Various minor fixes for code smells
  • Some dependency upgrades
  • Now using Jakarta as the JAXB implementation #1076
  • Fixed SCOP URL #1077
Changelog

Sourced from org.biojava:biojava-core's changelog.

BioJava 7.1.1

Fixed

  • Now mmCIF files that have no author fields in atom_site can be read (e.g. from PyMol or ESMAtlas) #775 #1083
  • No evaluations of arguments in debug level log statements #1086 #789

Removed

  • Minor removal from biojava-core: FileDownloadUtils::copy, replaced by Files::copy

BioJava 7.1.0

Added

  • Class FastaStreamer to read FASTA-formatted files using Java streams

Fixed

  • Various minor fixes for code smells
  • Some dependency upgrades
  • Now using Jakarta as the JAXB implementation #1076
  • Fixed SCOP URL #1077
Commits
  • 3eaf165 [maven-release-plugin] prepare release biojava-7.1.1
  • 7ed50c1 Updating changelog for next release
  • 81e0544 Merge pull request #1086 from jlerbsc/master
  • f94e577 Merge pull request #1085 from josemduarte/miscfixes
  • 1ac29b3 fix sonar issue 2629 Logging arguments should not require evaluation
  • 7f8f95e Typo
  • 874ce88 Merge remote-tracking branch 'origin/master'
  • de0ef2a Docs
  • 8b0c430 Merge pull request #1083 from josemduarte/parseEsmCifFix
  • df2e83d Merge branch 'master' into miscfixes
  • Additional commits viewable in compare view

Updates org.biojava:biojava-alignment from 7.0.2 to 7.1.1

Release notes

Sourced from org.biojava:biojava-alignment's releases.

BioJava 7.1.1

Fixed

  • Now mmCIF files that have no author fields in atom_site can be read (e.g. from PyMol or ESMAtlas) #775 #1083
  • No evaluations of arguments in debug level log statements #1086 #789

Removed

  • Minor removal from biojava-core: FileDownloadUtils::copy, replaced by Files::copy

BioJava 7.1.0

Added

  • Class FastaStreamer to read FASTA-formatted files using Java streams

Fixed

  • Various minor fixes for code smells
  • Some dependency upgrades
  • Now using Jakarta as the JAXB implementation #1076
  • Fixed SCOP URL #1077
Changelog

Sourced from org.biojava:biojava-alignment's changelog.

BioJava 7.1.1

Fixed

  • Now mmCIF files that have no author fields in atom_site can be read (e.g. from PyMol or ESMAtlas) #775 #1083
  • No evaluations of arguments in debug level log statements #1086 #789

Removed

  • Minor removal from biojava-core: FileDownloadUtils::copy, replaced by Files::copy

BioJava 7.1.0

Added

  • Class FastaStreamer to read FASTA-formatted files using Java streams

Fixed

  • Various minor fixes for code smells
  • Some dependency upgrades
  • Now using Jakarta as the JAXB implementation #1076
  • Fixed SCOP URL #1077
Commits
  • 3eaf165 [maven-release-plugin] prepare release biojava-7.1.1
  • 7ed50c1 Updating changelog for next release
  • 81e0544 Merge pull request #1086 from jlerbsc/master
  • f94e577 Merge pull request #1085 from josemduarte/miscfixes
  • 1ac29b3 fix sonar issue 2629 Logging arguments should not require evaluation
  • 7f8f95e Typo
  • 874ce88 Merge remote-tracking branch 'origin/master'
  • de0ef2a Docs
  • 8b0c430 Merge pull request #1083 from josemduarte/parseEsmCifFix
  • df2e83d Merge branch 'master' into miscfixes
  • Additional commits viewable in compare view

Updates org.apache.logging.log4j:log4j-api from 2.22.1 to 2.23.1

Updates org.apache.logging.log4j:log4j-core from 2.22.1 to 2.23.1

Updates org.apache.logging.log4j:log4j-1.2-api from 2.22.1 to 2.23.1

Updates org.apache.logging.log4j:log4j-slf4j-impl from 2.22.1 to 2.23.1

Updates org.apache.arrow:arrow-vector from 14.0.2 to 15.0.1

Commits

Updates org.apache.arrow:arrow-memory-netty from 14.0.2 to 15.0.1

Updates org.junit.jupiter:junit-jupiter-engine from 5.10.1 to 5.10.2

Release notes

Sourced from org.junit.jupiter:junit-jupiter-engine's releases.

JUnit 5.10.2 = Platform 1.10.2 + Jupiter 5.10.2 + Vintage 5.10.2

See Release Notes.

Full Changelog: junit-team/junit5@r5.10.1...r5.10.2

Commits
  • 4c0ddda Release 5.10.2
  • 463a147 Finalize release notes for 5.10.2
  • 43c105a Revert "Apply method predicate before searching type hierarchy"
  • 63d464d Revert "Harmonize application of method and field filters in search algorithms"
  • 85ec2fc Revert "Apply field predicate before searching type hierarchy"
  • 6209006 Update release notes
  • 5ee499f Fix CI build
  • d919ba7 Namespace user-specific build parameters
  • e26cd83 Prepare release notes for 5.10.2
  • ec8d428 Include LauncherInterceptor in launcher module declaration
  • Additional commits viewable in compare view

Updates org.junit.vintage:junit-vintage-engine from 5.10.1 to 5.10.2

Release notes

Sourced from org.junit.vintage:junit-vintage-engine's releases.

JUnit 5.10.2 = Platform 1.10.2 + Jupiter 5.10.2 + Vintage 5.10.2

See Release Notes.

Full Changelog: junit-team/junit5@r5.10.1...r5.10.2

Commits
  • 4c0ddda Release 5.10.2
  • 463a147 Finalize release notes for 5.10.2
  • 43c105a Revert "Apply method predicate before searching type hierarchy"
  • 63d464d Revert "Harmonize application of method and field filters in search algorithms"
  • 85ec2fc Revert "Apply field predicate before searching type hierarchy"
  • 6209006 Update release notes
  • 5ee499f Fix CI build
  • d919ba7 Namespace user-specific build parameters
  • e26cd83 Prepare release notes for 5.10.2
  • ec8d428 Include LauncherInterceptor in launcher module declaration
  • Additional commits viewable in compare view

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Bumps the dev-dependencies group in /symja_android_library with 16 updates:

| Package | From | To |
| --- | --- | --- |
| [com.fasterxml.jackson.core:jackson-databind](https://github.com/FasterXML/jackson) | `2.16.1` | `2.16.2` |
| com.fasterxml.jackson.datatype:jackson-datatype-jsr310 | `2.16.1` | `2.16.2` |
| [io.undertow:undertow-core](https://github.com/undertow-io/undertow) | `2.3.10.Final` | `2.3.12.Final` |
| [io.undertow:undertow-servlet](https://github.com/undertow-io/undertow) | `2.3.10.Final` | `2.3.12.Final` |
| [it.unimi.dsi:fastutil](https://github.com/vigna/fastutil) | `8.5.12` | `8.5.13` |
| [it.unimi.dsi:fastutil-core](https://github.com/vigna/fastutil) | `8.5.12` | `8.5.13` |
| [org.biojava:biojava-core](https://github.com/biojava/biojava) | `7.0.2` | `7.1.1` |
| [org.biojava:biojava-alignment](https://github.com/biojava/biojava) | `7.0.2` | `7.1.1` |
| org.apache.logging.log4j:log4j-api | `2.22.1` | `2.23.1` |
| org.apache.logging.log4j:log4j-core | `2.22.1` | `2.23.1` |
| org.apache.logging.log4j:log4j-1.2-api | `2.22.1` | `2.23.1` |
| org.apache.logging.log4j:log4j-slf4j-impl | `2.22.1` | `2.23.1` |
| [org.apache.arrow:arrow-vector](https://github.com/apache/arrow) | `14.0.2` | `15.0.1` |
| org.apache.arrow:arrow-memory-netty | `14.0.2` | `15.0.1` |
| [org.junit.jupiter:junit-jupiter-engine](https://github.com/junit-team/junit5) | `5.10.1` | `5.10.2` |
| [org.junit.vintage:junit-vintage-engine](https://github.com/junit-team/junit5) | `5.10.1` | `5.10.2` |


Updates `com.fasterxml.jackson.core:jackson-databind` from 2.16.1 to 2.16.2
- [Commits](https://github.com/FasterXML/jackson/commits)

Updates `com.fasterxml.jackson.datatype:jackson-datatype-jsr310` from 2.16.1 to 2.16.2

Updates `io.undertow:undertow-core` from 2.3.10.Final to 2.3.12.Final
- [Commits](undertow-io/undertow@2.3.10.Final...2.3.12.Final)

Updates `io.undertow:undertow-servlet` from 2.3.10.Final to 2.3.12.Final
- [Commits](undertow-io/undertow@2.3.10.Final...2.3.12.Final)

Updates `it.unimi.dsi:fastutil` from 8.5.12 to 8.5.13
- [Changelog](https://github.com/vigna/fastutil/blob/master/CHANGES)
- [Commits](https://github.com/vigna/fastutil/commits)

Updates `it.unimi.dsi:fastutil-core` from 8.5.12 to 8.5.13
- [Changelog](https://github.com/vigna/fastutil/blob/master/CHANGES)
- [Commits](https://github.com/vigna/fastutil/commits)

Updates `org.biojava:biojava-core` from 7.0.2 to 7.1.1
- [Release notes](https://github.com/biojava/biojava/releases)
- [Changelog](https://github.com/biojava/biojava/blob/master/CHANGELOG.md)
- [Commits](biojava/biojava@biojava-7.0.2...biojava-7.1.1)

Updates `org.biojava:biojava-alignment` from 7.0.2 to 7.1.1
- [Release notes](https://github.com/biojava/biojava/releases)
- [Changelog](https://github.com/biojava/biojava/blob/master/CHANGELOG.md)
- [Commits](biojava/biojava@biojava-7.0.2...biojava-7.1.1)

Updates `org.apache.logging.log4j:log4j-api` from 2.22.1 to 2.23.1

Updates `org.apache.logging.log4j:log4j-core` from 2.22.1 to 2.23.1

Updates `org.apache.logging.log4j:log4j-1.2-api` from 2.22.1 to 2.23.1

Updates `org.apache.logging.log4j:log4j-slf4j-impl` from 2.22.1 to 2.23.1

Updates `org.apache.arrow:arrow-vector` from 14.0.2 to 15.0.1
- [Commits](apache/arrow@go/v14.0.2...go/v15.0.1)

Updates `org.apache.arrow:arrow-memory-netty` from 14.0.2 to 15.0.1

Updates `org.junit.jupiter:junit-jupiter-engine` from 5.10.1 to 5.10.2
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](junit-team/junit5@r5.10.1...r5.10.2)

Updates `org.junit.vintage:junit-vintage-engine` from 5.10.1 to 5.10.2
- [Release notes](https://github.com/junit-team/junit5/releases)
- [Commits](junit-team/junit5@r5.10.1...r5.10.2)

---
updated-dependencies:
- dependency-name: com.fasterxml.jackson.core:jackson-databind
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: com.fasterxml.jackson.datatype:jackson-datatype-jsr310
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: io.undertow:undertow-core
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: io.undertow:undertow-servlet
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: it.unimi.dsi:fastutil
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: it.unimi.dsi:fastutil-core
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: org.biojava:biojava-core
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.biojava:biojava-alignment
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.apache.logging.log4j:log4j-api
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.apache.logging.log4j:log4j-core
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.apache.logging.log4j:log4j-1.2-api
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.apache.logging.log4j:log4j-slf4j-impl
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: org.apache.arrow:arrow-vector
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: org.apache.arrow:arrow-memory-netty
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: org.junit.jupiter:junit-jupiter-engine
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: org.junit.vintage:junit-vintage-engine
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file java Pull requests that update Java code labels Mar 11, 2024
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dependabot bot commented on behalf of github Mar 12, 2024

Superseded by #145.

@dependabot dependabot bot closed this Mar 12, 2024
@dependabot dependabot bot deleted the dependabot/maven/symja_android_library/dev-dependencies-7ab46e87f9 branch March 12, 2024 23:34
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