Releases: Harvard-ACMG/cannon-env
Releases · Harvard-ACMG/cannon-env
cannon-env 2.0.7
Release date: 04 Dec 2024
CHANGELOG
Changed
- Add module load commands for TAU profiler to gnu12 environment files
Full Changelog: 2.0.6...2.0.7
cannon-env 2.0.6
Release date: 29 Oct 2024
CHANGELOG
Changed
- Comment out
ulimit -c unlimited
in environment files, as this is now disallowed on Cannon
Full Changelog: 2.0.5...2.0.6
cannon-env 2.0.5
Release date: 13 May 2024
CHANGELOG
Fixed
- Now use if statements instead of
[[ -f ~/.bash_aliases ]]
etc. are present in the root folder. These cause an error code to persist as described in #3.
cannon-env 2.0.4
Release date: 25 Mar 2024
CHANGELOG
Added
- Module load commands for the Spack-built
rclone
package
Full Changelog: 2.0.3...2.0.4
cannon-env 2.0.3
Release date: 30 Jan 2024
What's Changed
- Add alias "sainfo" to get information on sapphire partition by @msulprizio in #2
New Contributors
- @msulprizio made their first contribution in #2
Full Changelog: 2.0.2...2.0.3
cannon-env 2.0.2
Release date: 04 Jan 2024
CHANGELOG
Fixed
- Updated VT100 keybindings in
.root/.Xresources
to allow CTRL-INSERT (cut) and SHIFT-INSERT (paste)
Full Changelog: 2.0.1...2.0.2
cannon-env 2.0.1
Release date 15 Dec 2023
CHANGELOG
Fixed
- Removed the
&& ssh -CY $SLURM_JOB_NODELIST
, as this was causing some X11 forwarding issues after the update to SLURM 23.02.7
Full Changelog: 2.0.0...2.0.1
cannon-env 2.0.0
CHANGELOG
Added
- Environment files for Intel compilers in
envs/intel23
README.md
files inenvs/gnu10
,envs/gnu12
,envs/intel23
- Now load Spack-built modules for
jq
andparallel
Changed
- The
envs
folder has been subdivided intognu10
,gnu12
, andintel23
subdirectories - Moved content from
envs/README.md
toREADME.md
in subdirectories - GCHP environment files now point to ESMF 8.4.2 installation
- Unload all packages loaded with
spack load
in environment files - Send the output of
unalias diff
to/dev/null
to squelch error messages - Added extra xterm settings and font selections in
root/.Xresources
- Rewrote
copy_cannon_env
to back up configuration files - Updated
root/.Xresources
with additional options and font selections .bash_profile
,.bashrc
, etc. files are now chmod 644- Updated
bin/myjobs
to exclude job ID's ending in.1
,.2
, etc. - The
bin/interactive
script uses--mem
instead of--mem-per-cpu
- Updated env files for the new library path
/n/jacob_lab/Lab/RockyLinux/
- Updated
README.md
files accordingly
Removed
- Removed the
ROCKY_ROOT
variable from environment files
What's Changed
New Contributors
Full Changelog: 1.0.0...2.0.0
cannon-env 1.0.0
Release Date: 05 Jun 2023
CHANGELOG
Added
- Environment files for RockyLinux (w/ FASRC + Spack modules) in
envs/*
- Added logo and links to the
README.md
file - Added
CHANGELOG.md
file - Added
LICENSE.txt
file - Added environment files that only load FASRC-built packages
- Added
ROCKY_ROOT
to env files (points to RockyLinux library root folder)
Changed
- Move Spack intitialization and module path updates to top of environment file scripts
- Add more informational messages in environment files
- Make sure NETCDF_HOME is defined properly in environment files
- Do not load CDO module in environment files, use "spack load" instead
- Explicitly load netcdf-c in module files
- Updated
envs/README.md
with a table of env files, plus subsections - Now load FASRC-built IDL module in GCClassic environment files
- Renamed
*.nospack.env
environment files to*.minimal.env
Removed
- Environment files for CentOS (w/ FASRC modules) in
envs/*
Full Changelog: 0.1.0...1.0.0
cannon-env 0.1.0
Release date: 23 Feb 2023
Overview
This version (0.1.0) is the "status quo" for Cannon configuration files under CentOS7.
Version 0.1.0 will be superseded by version 1.0.0, which will contain configuration files for RockyLinux 8.7.