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Fix sed command
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JoshLoecker committed Mar 3, 2023
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -29,7 +29,7 @@ RUN conda config --quiet --add channels conda-forge \
&& conda config --quiet --add channels bioconda \
&& conda config --quiet --add channels r \
# Remove python from pinned versions; this allows us to update python. From: https://stackoverflow.com/a/11245372 \
&& sed -i "/^python 3/s/.*/python ${PYTHON_SUB_VERSION}" /opt/conda/conda-meta/pinned \
&& sed -i "s|^python .*|python ${PYTHON_SUB_VERSION}|" /opt/conda/conda-meta/pinned \
&& mamba env update --quiet --name=base --file="${HOME}/environment.yaml" \
&& mamba clean --quiet --all --force-pkgs-dirs --yes \
&& R -e "devtools::install_github('babessell1/zFPKM')" \
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