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Update scipy version
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JoshLoecker committed Mar 8, 2023
1 parent c04197e commit fbb5f36
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -18,7 +18,7 @@ RUN conda config --quiet --add channels conda-forge \
&& conda config --quiet --add channels gurobi \
# Remove python from pinned versions; this allows us to update python. From: https://stackoverflow.com/a/11245372 \
&& sed -i "s|^python .*||" /opt/conda/conda-meta/pinned \
&& echo "HERE" && echo /opt/conda/conda-meta/pinned \
&& echo "HERE" && cat /opt/conda/conda-meta/pinned \
&& mamba env update --quiet --name=base --file="${HOME}/environment.yaml" \
&& mamba clean --quiet --all --force-pkgs-dirs --yes \
&& R -e "devtools::install_github('babessell1/zFPKM')" \
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2 changes: 1 addition & 1 deletion environment.yaml
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Expand Up @@ -36,7 +36,7 @@ dependencies:
- python==3.11.0
- requests==2.28.1
- rpy2==3.5.1
- scipy==1.8.1
- scipy==1.10.1
- sqlalchemy==1.4.39
- unidecode==1.3.4
- xlrd==2.0.1
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