Push modifications with gudhi 3.2.0

Hind-M · Jun 11, 2020 · 4d46285 · 4d46285
1 parent 3ce39c0
commit 4d46285
Show file tree

Hide file tree

Showing 12 changed files with 8,679 additions and 791 deletions.
diff --git a/.binder/environment.yml b/.binder/environment.yml
@@ -10,4 +10,6 @@ dependencies:
   - scikit-learn
   - tensorflow
   - plotly
+  - pot
+  - networkx
   - gudhi
diff --git a/Tuto-GUDHI-Barycenters-of-persistence-diagrams.ipynb b/Tuto-GUDHI-Barycenters-of-persistence-diagrams.ipynb
diff --git a/Tuto-GUDHI-ConfRegions-PersDiag-datapoints.ipynb b/Tuto-GUDHI-ConfRegions-PersDiag-datapoints.ipynb
diff --git a/Tuto-GUDHI-DTM-filtrations.ipynb b/Tuto-GUDHI-DTM-filtrations.ipynb
diff --git a/Tuto-GUDHI-Expected-persistence-diagrams.ipynb b/Tuto-GUDHI-Expected-persistence-diagrams.ipynb
diff --git a/Tuto-GUDHI-alpha-complex-visualization.ipynb b/Tuto-GUDHI-alpha-complex-visualization.ipynb
diff --git a/Tuto-GUDHI-cubical-complexes.ipynb b/Tuto-GUDHI-cubical-complexes.ipynb
diff --git a/Tuto-GUDHI-extended-persistence.ipynb b/Tuto-GUDHI-extended-persistence.ipynb
diff --git a/Tuto-GUDHI-kPDTM-kPLM.ipynb b/Tuto-GUDHI-kPDTM-kPLM.ipynb
diff --git a/Tuto-GUDHI-persistence-diagrams.ipynb b/Tuto-GUDHI-persistence-diagrams.ipynb
diff --git a/Tuto-GUDHI-representations.ipynb b/Tuto-GUDHI-representations.ipynb
diff --git a/Tuto-GUDHI-simplex-Trees.ipynb b/Tuto-GUDHI-simplex-Trees.ipynb
@@ -33,7 +33,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 16,
+   "execution_count": 1,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -72,7 +72,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 17,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -94,7 +94,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 18,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -103,7 +103,7 @@
        "True"
       ]
      },
-     "execution_count": 18,
+     "execution_count": 3,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -123,7 +123,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 19,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -132,7 +132,7 @@
        "False"
       ]
      },
-     "execution_count": 19,
+     "execution_count": 4,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -150,7 +150,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 20,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -166,7 +166,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 21,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -213,7 +213,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 22,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [
     {
@@ -222,7 +222,7 @@
        "1"
       ]
      },
-     "execution_count": 22,
+     "execution_count": 7,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -240,7 +240,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 23,
+   "execution_count": 8,
    "metadata": {},
    "outputs": [
     {
@@ -249,7 +249,7 @@
        "4"
       ]
      },
-     "execution_count": 23,
+     "execution_count": 8,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -267,7 +267,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 24,
+   "execution_count": 9,
    "metadata": {},
    "outputs": [
     {
@@ -276,7 +276,7 @@
        "7"
       ]
      },
-     "execution_count": 24,
+     "execution_count": 9,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -294,7 +294,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 25,
+   "execution_count": 10,
    "metadata": {
     "scrolled": true
    },
@@ -303,7 +303,7 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "[([0, 1], 0.0), ([0], 0.0), ([1, 2], 0.0), ([1, 3], 0.0), ([1], 0.0), ([2], 0.0), ([3], 0.0)]\n"
+      "<generator object at 0x7f46e8bf7558>\n"
      ]
     }
    ],
@@ -320,7 +320,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 26,
+   "execution_count": 11,
    "metadata": {},
    "outputs": [
     {
@@ -329,7 +329,7 @@
        "False"
       ]
      },
-     "execution_count": 26,
+     "execution_count": 11,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -349,7 +349,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 27,
+   "execution_count": 12,
    "metadata": {},
    "outputs": [
     {
@@ -399,7 +399,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 28,
+   "execution_count": 13,
    "metadata": {},
    "outputs": [
     {
@@ -438,7 +438,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 29,
+   "execution_count": 14,
    "metadata": {},
    "outputs": [
     {
@@ -477,7 +477,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 15,
    "metadata": {},
    "outputs": [
     {
@@ -486,7 +486,7 @@
        "0.8"
       ]
      },
-     "execution_count": 30,
+     "execution_count": 15,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -513,7 +513,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.6.10"
   },
   "toc": {
    "base_numbering": 1,