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Honghan authored Oct 17, 2019
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## Knowledge Graph based Phenotyping on Heterogenous Data Sources
- towards interpretable, reusable, reproducible phenotype computation in clinical data science.
- a project funded by Health Data Research UK
- a project funded by [Health Data Research UK: Graph-Based Data Federation for Healthcare Data Science](https://www.hdruk.ac.uk/projects/graph-based-data-federation-for-healthcare-data-science/)

### Why & What
Extracting patient phenotypes from routinely collected health data (such as Electronic Health Records) requires translating clinically-sound phenotype definitions into queries/computations executable on the underlying data sources by clinical researchers. This requires significant knowledge and skills to deal with heterogeneous and often *imperfect* data. Translations are time-consuming, error-prone and, most importantly, hard to share and reproduce across different settings. This project implements a **knowledge driven phenotyping framework** that
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