Skip to content

Commit

Permalink
Merge pull request #180 from zivy/correctInconsistentInformation
Browse files Browse the repository at this point in the history 
Harmonize detergent listing.
  • Loading branch information
@zivy
zivy authored Jul 17, 2024
2 parents 3f3ca62 + c8680e7 commit 01eb2db
Show file tree
Hide file tree
Showing 11 changed files with 22 additions and 22 deletions.
22 changes: 11 additions & 11 deletions data/reagent_resources.csv
View file
Original file line number Diff line number Diff line change
Expand Up @@ -1053,17 +1053,17 @@ Q16832,Primary Antibody,DDR2,Human,Goat,IgG,Polyclonal,R&D Systems,AF2538,Unconj
P49840,Primary Antibody,Phospho-GSK-3alpha,Human,Rabbit,IgG,36E9,Cell Signaling Technology,9316,Unconjugated,AB_659836,Stock,Multiplexed 2D Imaging,FFPE,Lymph Node,Follicular Lymphoma,0.3% Triton-X-100,pH 6 for 30 minutes ER1 (AR9961) and pH 9 for 30 minutes ER2 (AR9640) using the Leica Bond,NA,No,0000-0003-4379-8967,NA,0000-0003-4379-8967
P08575,Primary Antibody,CD45,Human,Mouse,IgG1,2B11 + PD7/26,Novus Biologicals,NBP2-34528AF700,AF700,NA,Stock,Multiplexed 2D Imaging,FFPE,Lymph Node,Follicular Lymphoma,0.3% Triton-X-100,pH 6 for 30 minutes ER1 (AR9961) and pH 9 for 30 minutes ER2 (AR9640) using the Leica Bond,NA,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
Q6FHL8,Primary Antibody,CTGF,Human,Rabbit,IgG,OT11F4,FabGennix,CTGF-FITC,FITC,NA,Stock,Multiplexed 2D Imaging,FFPE,Lymph Node,Follicular Lymphoma,0.3% Triton-X-100,pH 6 for 30 minutes ER1 (AR9961) and pH 9 for 30 minutes ER2 (AR9640) using the Leica Bond,NA,No,0000-0003-4379-8967,NA,0000-0003-4379-8967
E9PVX6,Primary Antibody,Ki-67,Mouse,Rat,IgG2a,SolA15,Thermo Fisher Scientific,606-5698-82,AF660,AB_2896286,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q08481,Primary Antibody,CD31,Mouse,Rat,IgG2a,MEC13.3,BioLegend,102515,AF647,AB_2161030,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P06332,Primary Antibody,CD4,Mouse,Rat,IgG2a,RM4-5,BioLegend,100533,AF647,AB_493372,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P06332,Primary Antibody,CD4,Mouse,Rat,IgG2a,RM4-5,BioLegend,100533,AF647,AB_493372,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Spleen,Healthy,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
NA,Primary Antibody,mCherrry,Mouse,Chicken,IgY,polyclonal,Novus Biologicals,NBP2-25158,NA,AB_2636881,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q9EQX4,Primary Antibody,Iba-1,Mouse,Rabbit,IgG,polyclonal,FUJIFILM Wako Chemicals U.S.A. Corporation,019-19741,NA,AB_839504,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P63158,Primary Antibody,CXCL12,Mouse,Rabbit,IgG,polyclonal,Abcam,AB25117,NA,AB_2088164,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P70658,Primary Antibody,CXCR4,Mouse,Rabbit,IgG,polyclonal,Novus Biologicals,NB-100 74396,NA,AB_1048484,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P56485,Primary Antibody,CXCR7,Mouse,Rabbit,IgG,polyclonal,Novus Biologicals,NBP2-24779G,DyLight 488,NA,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q9QXH4,Primary Antibody,CD11c,Mouse,Armenian Hamster,IgG,N418,BioLegend,117314,AF647,AB_492850,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P03995,Primary Antibody,GFAP,Mouse,Mouse,IgG1,GA5,Thermo Fisher Scientific,41-9892-82,eF570,AB_2573656,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
E9PVX6,Primary Antibody,Ki-67,Mouse,Rat,IgG2a,SolA15,Thermo Fisher Scientific,606-5698-82,AF660,AB_2896286,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q08481,Primary Antibody,CD31,Mouse,Rat,IgG2a,MEC13.3,BioLegend,102515,AF647,AB_2161030,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P06332,Primary Antibody,CD4,Mouse,Rat,IgG2a,RM4-5,BioLegend,100533,AF647,AB_493372,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P06332,Primary Antibody,CD4,Mouse,Rat,IgG2a,RM4-5,BioLegend,100533,AF647,AB_493372,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Spleen,Healthy,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
NA,Primary Antibody,mCherrry,Mouse,Chicken,IgY,polyclonal,Novus Biologicals,NBP2-25158,NA,AB_2636881,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q9EQX4,Primary Antibody,Iba-1,Mouse,Rabbit,IgG,polyclonal,FUJIFILM Wako Chemicals U.S.A. Corporation,019-19741,NA,AB_839504,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P63158,Primary Antibody,CXCL12,Mouse,Rabbit,IgG,polyclonal,Abcam,AB25117,NA,AB_2088164,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P70658,Primary Antibody,CXCR4,Mouse,Rabbit,IgG,polyclonal,Novus Biologicals,NB-100 74396,NA,AB_1048484,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P56485,Primary Antibody,CXCR7,Mouse,Rabbit,IgG,polyclonal,Novus Biologicals,NBP2-24779G,DyLight 488,NA,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
Q9QXH4,Primary Antibody,CD11c,Mouse,Armenian Hamster,IgG,N418,BioLegend,117314,AF647,AB_492850,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P03995,Primary Antibody,GFAP,Mouse,Mouse,IgG1,GA5,Thermo Fisher Scientific,41-9892-82,eF570,AB_2573656,Stock,Multiplexed 2D Imaging,4% PFA Fixed Frozen,Brain,Tumor,0.3% Triton-X-100,NA,NA,Yes,0000-0002-6944-6997,NA,0000-0002-6944-6997
P56199,Primary Antibody,CD49a,Human,Mouse,IgG1,TS2/7,BioLegend,328303,PE,AB_1236441,Stock,IBEX2D Manual,1:4 Cytofix/Cytoperm Fixed Frozen,Lymph Node,NA,0.3% Triton-X-100,NA,1 mg/ml LiBH4 15 minutes,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
P10415,Primary Antibody,BCL2,Human,Rabbit,IgG,SP66,Abcam,ab236221,Unconjugated,NA,Stock,Cell DIVE-IBEX,FFPE,Lymph Node,Follicular Lymphoma,0.3% Triton-X-100,pH 6 for 30 minutes ER1 (AR9961) and pH 9 for 30 minutes ER2 (AR9640) using the Leica Bond,NA,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
P10415,Primary Antibody,BCL2,Human,Rabbit,IgG,SP66,Abcam,ab236221,Unconjugated,NA,Stock,Cell DIVE-IBEX,FFPE,Lymph Node,NA,0.3% Triton-X-100,pH 6 for 30 minutes ER1 (AR9961) and pH 9 for 30 minutes ER2 (AR9640) using the Leica Bond,NA,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
Expand Down
2 changes: 1 addition & 1 deletion docs/supporting_material/CD11c_AF647/0000-0002-6944-6997.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ layout: default

| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:-----------------|:----------|:------------|:----------|-----------------:|:------------|:----------|:---------------|:-----------------------|:----------------------|:----------------|:---------------|:-------------------|:-------------------------------|:------------------------------|:------------|:-------------------------------------------------------------|:-----------|:-------------------------------------------------------------|:------------|
| Q9QXH4 | Primary Antibody | CD11c | Mouse | Armenian Hamster | IgG | N418 | BioLegend | 117314 | AF647 | AB_492850 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| Q9QXH4 | Primary Antibody | CD11c | Mouse | Armenian Hamster | IgG | N418 | BioLegend | 117314 | AF647 | AB_492850 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |

# Publications

Expand Down
2 changes: 1 addition & 1 deletion docs/supporting_material/CD31_AF647/0000-0002-6944-6997.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ layout: default

| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:----------|-----------------:|:------------|:-----------|:---------------|:-----------------------|:----------------------|:----------------|:---------------|:-------------------|:-------------------------------|:------------------------------|:------------|:-------------------------------------------------------------|:-----------|:-------------------------------------------------------------|:------------|
| Q08481 | Primary Antibody | CD31 | Mouse | Rat | IgG2a | MEC13.3 | BioLegend | 102515 | AF647 | AB_2161030 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| Q08481 | Primary Antibody | CD31 | Mouse | Rat | IgG2a | MEC13.3 | BioLegend | 102515 | AF647 | AB_2161030 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |

# Publications

Expand Down
4 changes: 2 additions & 2 deletions docs/supporting_material/CD4_AF647/0000-0002-6944-6997.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,8 +6,8 @@ layout: default

| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:----------|-----------------:|:------------|:----------|:---------------|:-----------------------|:----------------------|:----------------|:---------------|:-------------------|:-------------------------------|:------------------------------|:------------|:-------------------------------------------------------------|:-----------|:-------------------------------------------------------------|:------------|
| P06332 | Primary Antibody | CD4 | Mouse | Rat | IgG2a | RM4-5 | BioLegend | 100533 | AF647 | AB_493372 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| P06332 | Primary Antibody | CD4 | Mouse | Rat | IgG2a | RM4-5 | BioLegend | 100533 | AF647 | AB_493372 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Spleen | Healthy | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| P06332 | Primary Antibody | CD4 | Mouse | Rat | IgG2a | RM4-5 | BioLegend | 100533 | AF647 | AB_493372 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| P06332 | Primary Antibody | CD4 | Mouse | Rat | IgG2a | RM4-5 | BioLegend | 100533 | AF647 | AB_493372 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Spleen | Healthy | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |

# Publications

Expand Down
2 changes: 1 addition & 1 deletion docs/supporting_material/CXCL12_NA/0000-0002-6944-6997.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ layout: default

| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:---------|:-----------------|:------------|:-----------|:---------------|:-----------------------|:----------------------|:----------------|:---------------|:-------------------|:-------------------------------|:------------------------------|:------------|:-------------------------------------------------------------|:-----------|:-------------------------------------------------------------|:------------|
| P63158 | Primary Antibody | CXCL12 | Mouse | Rabbit | IgG | polyclonal | Abcam | AB25117 | NA | AB_2088164 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| P63158 | Primary Antibody | CXCL12 | Mouse | Rabbit | IgG | polyclonal | Abcam | AB25117 | NA | AB_2088164 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |

# Publications

Expand Down
2 changes: 1 addition & 1 deletion docs/supporting_material/CXCR4_NA/0000-0002-6944-6997.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ layout: default

| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:------------------|:-----------------|:------------|:-----------|:---------------|:-----------------------|:----------------------|:----------------|:---------------|:-------------------|:-------------------------------|:------------------------------|:------------|:-------------------------------------------------------------|:-----------|:-------------------------------------------------------------|:------------|
| P70658 | Primary Antibody | CXCR4 | Mouse | Rabbit | IgG | polyclonal | Novus Biologicals | NB-100 74396 | NA | AB_1048484 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |
| P70658 | Primary Antibody | CXCR4 | Mouse | Rabbit | IgG | polyclonal | Novus Biologicals | NB-100 74396 | NA | AB_1048484 | Stock | Multiplexed 2D Imaging | 4% PFA Fixed Frozen | Brain | Tumor | 0.3% Triton-X-100 | NA | NA | Yes | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | NA | [0000-0002-6944-6997](https://orcid.org/0000-0002-6944-6997) | [1](#notes) |

# Publications

Expand Down
Loading

0 comments on commit 01eb2db

Please sign in to comment.