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Correcting errors.
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resolves #162
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@zivy
zivy committed Jul 5, 2024
1 parent 7400b70 commit a17c322
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4 changes: 2 additions & 2 deletions data/reagent_resources.csv
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Expand Up @@ -826,10 +826,10 @@ P01903,Primary Antibody,HLA-DR,Human,Mouse,IgG1,TAL 1B5,Abcam,ab176408 (Unconjug
P11215,Primary Antibody,CD11b,Human,Rabbit,IgG,EP1345Y,Abcam,ab187537 (Unconjugated),AF647,NA,Custom,IBEX2D Manual,FFPE,Tonsil,NA,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes),Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
NA,Primary Antibody,Cytokeratin (Pan),Human,Mouse,IgG1,AE1/AE3,Thermo Fisher Scientific,53-9003-82,AF488,AB_2574301,Stock,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes),Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P20702,Primary Antibody,CD11c,Human,Rabbit,IgG,EP1347Y,Abcam,ab216655 (Unconjugated),AF555,NA,Custom,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes),Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P11836,Primary Antibody,CD20,Human,Mouse,IgG2a,L26,Thermo Fisher Scientific,42-0202-82,eF615,AB_10853517,Stock,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 for more than 120 minutes,Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P11836,Primary Antibody,CD20,Human,Mouse,IgG2a,L26,Thermo Fisher Scientific,42-0202-82,eF615,AB_10853517,Stock,IBEX2D Manual,FFPE,Tonsil,NA,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 for more than 120 minutes,Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P32302,Primary Antibody,CD185 (CXCR5),Human,Rat,IgG2b,RF8B2,BD Biosciences,552032,Unconjugated,AB_394324,Stock,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),NA,Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
Q53X90,Primary Antibody,CXCL13,Human,Goat,IgG,Polyclonal,R&D Systems,AF801,Unconjugated,AB_2892755,Stock,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),NA,Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P11836,Primary Antibody,CD20,Human,Mouse,IgG2a,L26,Thermo Fisher Scientific,50-0202-82,eF660,AB_11150959,Stock,IBEX2D Manual,FFPE,Tonsil,Metastatic Ovarian Cancer,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes),Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
P11836,Primary Antibody,CD20,Human,Mouse,IgG2a,L26,Thermo Fisher Scientific,50-0202-82,eF660,AB_11150959,Stock,IBEX2D Manual,FFPE,Tonsil,NA,0.3% Triton-X-100,pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000),1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes),Yes,0000-0001-9561-4256,NA,0000-0001-9561-4256
NA,Streptavidin Conjugate,NA,Human,NA,NA,NA,Thermo Fisher Scientific,S11224,AF532,NA,Stock,Multiplexed 2D Imaging,FFPE,Tonsil,NA,0.3% Triton-X-100,pH 6 for 40 minutes at 95C (AR6 Akoya Biosciences AR600250ML),NA,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
NA,Streptavidin Conjugate,NA,Human,NA,NA,NA,AAT Bioquest,16956,iF514,NA,Stock,Multiplexed 2D Imaging,FFPE,Tonsil,NA,0.3% Triton-X-100,pH 6 for 40 minutes at 95C (AR6 Akoya Biosciences AR600250ML),NA,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
NA,Streptavidin Conjugate,NA,Human,NA,NA,NA,Thermo Fisher Scientific,48-4317-82,eF450,NA,Stock,IBEX2D Manual,1:4 Cytofix/Cytoperm Fixed Frozen,Lymph Node,NA,0.3% Triton-X-100,NA,1 mg/ml LiBH4 15 minutes,Yes,0000-0003-4379-8967,NA,0000-0003-4379-8967
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2 changes: 1 addition & 1 deletion docs/supporting_material/CD20_eF615/0000-0001-9561-4256.md
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Expand Up @@ -7,7 +7,7 @@ layout: default
| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:-------------------------|:-----------------|:------------|:------------|:---------------|:--------------|:----------------------|:----------------|:--------------------------|:------------------|:-------------------------------------------------------------------|:----------------------------------------|:------------|:--------------------|:-----------|:--------------------|:------------|
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 42-0202-82 | eF615 | AB_10853517 | Stock | IBEX2D Manual | FFPE | Lymph Node | Metastatic Ovarian Cancer | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 for more than 120 minutes | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 42-0202-82 | eF615 | AB_10853517 | Stock | IBEX2D Manual | FFPE | Tonsil | Metastatic Ovarian Cancer | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 for more than 120 minutes | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 42-0202-82 | eF615 | AB_10853517 | Stock | IBEX2D Manual | FFPE | Tonsil | NA | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 for more than 120 minutes | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| H9YXP1 | Primary Antibody | CD20 | Rhesus Macaque | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 42-0202-82 | eF615 | AB_10853517 | Stock | Multiplexed 2D Imaging | FFPE | Lymph Node | Infected | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | NA | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) [[1](#publications)] | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [2](#notes) |

# Publications
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2 changes: 1 addition & 1 deletion docs/supporting_material/CD20_eF660/0000-0001-9561-4256.md
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Expand Up @@ -7,7 +7,7 @@ layout: default
| UniProt Accession Number | Reagent Type | Target Name / Protein Biomarker | Target Species | Host Organism | Isotype | Clonality | Vendor | Catalog Number | Conjugate | RRID | Availability | Method | Tissue Preservation | Target Tissue | Tissue State | Detergent | Antigen Retrieval Conditions | Dye Inactivation Conditions | Recommend | Agree | Disagree | Contributor | Notes |
|:---------------------------|:-----------------|:----------------------------------|:-----------------|:----------------|:----------|:------------|:-------------------------|:-----------------|:------------|:------------|:---------------|:--------------|:----------------------|:----------------|:--------------------------|:------------------|:-------------------------------------------------------------------|:-----------------------------------------------------------------|:------------|:--------------------|:-----------|:--------------------|:------------|
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 50-0202-82 | eF660 | AB_11150959 | Stock | IBEX2D Manual | FFPE | Lymph Node | Metastatic Ovarian Cancer | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes) | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 50-0202-82 | eF660 | AB_11150959 | Stock | IBEX2D Manual | FFPE | Tonsil | Metastatic Ovarian Cancer | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes) | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| P11836 | Primary Antibody | CD20 | Human | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 50-0202-82 | eF660 | AB_11150959 | Stock | IBEX2D Manual | FFPE | Tonsil | NA | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | 1 mg/ml LiBH4 15 minutes (3 exchanges for a total of 45 minutes) | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [1](#notes) |
| H9YXP1 | Primary Antibody | CD20 | Rhesus Macaque | Mouse | IgG2a | L26 | Thermo Fisher Scientific | 50-0202-82 | eF660 | AB_11150959 | Stock | Multiplexed 2D Imaging | FFPE | Lymph Node | Infected | 0.3% Triton-X-100 | pH 9.5 for 15 minutes in a pressure cooker (Borg Decloaker BD1000) | NA | Yes | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) [[1](#publications)] | NA | [0000-0001-9561-4256](https://orcid.org/0000-0001-9561-4256) | [2](#notes) |

# Publications
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