setup for pyodide

.github/workflows/deploy.yml

@@ -0,0 +1,48 @@
+name: Build and Deploy
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - '*'
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Setup Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.11'
+      - name: Install the dependencies
+        run: |
+          python -m pip install -r requirements.txt
+      - name: Build the JupyterLite site
+        run: |
+          cp README.md content
+          jupyter lite build --contents content --output-dir dist
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v3
+        with:
+          path: ./dist
+
+  deploy:
+    needs: build
+    if: github.ref == 'refs/heads/main'
+    permissions:
+      pages: write
+      id-token: write
+
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+
+    runs-on: ubuntu-latest
+    steps:
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v4

requirements.txt

@@ -1,7 +1,52 @@
-jupyter-book
-jupytercards
-jupyterquiz
-matplotlib
-numpy
-sphinxcontrib.mermaid
-sphinxcontrib.tikz
+# Core modules (mandatory)
+jupyterlite-core==0.3.0
+jupyterlab~=4.1.6
+notebook~=7.1.2
+
+
+# Python kernel (optional)
+jupyterlite-pyodide-kernel==0.3.1
+
+# JavaScript kernel (optional)
+# jupyterlite-javascript-kernel==0.3.0
+
+# Language support (optional)
+# jupyterlab-language-pack-fr-FR
+# jupyterlab-language-pack-zh-CN
+
+# P5 kernel (optional)
+# jupyterlite-p5-kernel==0.1.0
+
+# JupyterLab: Fasta file renderer (optional)
+jupyterlab-fasta>=3.3.0,<4
+# JupyterLab: Geojson file renderer (optional)
+jupyterlab-geojson>=3.4.0,<4
+# JupyterLab: guided tour (optional)
+# TODO: re-enable after https://github.com/jupyterlab-contrib/jupyterlab-tour/issues/82
+# jupyterlab-tour
+# JupyterLab: dark theme
+jupyterlab-night
+# JupyterLab: Miami nights theme (optional)
+jupyterlab_miami_nights
+
+# Python: ipywidget library for Jupyter notebooks (optional)
+ipywidgets>=8.1.1,<9
+# Python: ipyevents library for Jupyter notebooks (optional)
+ipyevents>=2.0.1
+# Python: interative Matplotlib library for Jupyter notebooks (optional)
+ipympl>=0.8.2
+# Python: ipycanvas library for Jupyter notebooks (optional)
+ipycanvas>=0.9.1
+# Python: ipyleaflet library for Jupyter notebooks (optional)
+ipyleaflet
+
+# Python: plotting libraries (optional)
+# plotly>=5,<6
+# bqplot
+
+# qiskit>=1.0
+# qiskit-ibm-runtime #==0.23
+# pennylane>=0.36
+# cirq>=1.3
+# nbformat>=5.10
+# jsonschema>=4.21