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ICE 5.0.0
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@hplahar hplahar released this 06 Jun 20:26
5.0.0
e735132

New Features

  • Automatic Sequence Annotation
  • Support for SBOL 2
  • Sequence Annotation curation
  • Feature to restrict public sharing to admins only

Bug Fixes

  • ICE-6/ICE-14: Increase default limit of number of traces retrieved
  • Fixed issues with retrieving remote entry sequences
  • SYNBIO-1361: Handle pasted sequences when creating new entries
  • Fixed history deletion feature
  • Set appropriate owner when copying entries
  • Fixed issues with folder sharing
  • Fixed issue with web of registries search hanging when there are no results

Improvements

  • BLAST search performance improvements
  • Improved security
  • "Select all" for search results
  • More unit testing
  • Site configuration improvements
  • API for interacting with web of registries entries
  • Improved GenBank parser to handle genbank files without feature notes
  • Improvements to REST API error codes

Upgrade Notes

To upgrade from earlier versions of ICE, some database modifications need to be made. Remember to backup your database before performing these modifications

  • Delete the following columns from the sequence_feature table
    • feature_start
    • feature_end
    • description
  • Delete the following columns from the feature table
    • auto_find
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