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JesperDramsch committed Feb 11, 2024
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2 changes: 1 addition & 1 deletion .buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 36d1f6775f53f7e785259256bccabfdc
config: 66c4c40653e9b111779f5cbd37d1e205
tags: 645f666f9bcd5a90fca523b33c5a78b7
2 changes: 1 addition & 1 deletion backmatter/bibliography.html
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Expand Up @@ -555,7 +555,7 @@ <h1>Bibliography<a class="headerlink" href="#bibliography" title="Permalink to t

<p class="copyright">

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2 changes: 1 addition & 1 deletion backmatter/cite.html
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Expand Up @@ -475,7 +475,7 @@ <h1>Cite this Work<a class="headerlink" href="#cite-this-work" title="Permalink

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2 changes: 1 addition & 1 deletion frontmatter/conda-m1.html
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Expand Up @@ -491,7 +491,7 @@ <h1>Conda on Apple M1 Chip<a class="headerlink" href="#conda-on-apple-m1-chip" t

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2 changes: 1 addition & 1 deletion frontmatter/conda.html
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Expand Up @@ -489,7 +489,7 @@ <h1>Using Conda<a class="headerlink" href="#using-conda" title="Permalink to thi

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2 changes: 1 addition & 1 deletion frontmatter/data.html
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Expand Up @@ -483,7 +483,7 @@ <h1>Data<a class="headerlink" href="#data" title="Permalink to this heading">#</

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2 changes: 1 addition & 1 deletion frontmatter/installation.html
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Expand Up @@ -519,7 +519,7 @@ <h2>Using PIP<a class="headerlink" href="#using-pip" title="Permalink to this he

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2 changes: 1 addition & 1 deletion genindex.html
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Expand Up @@ -391,7 +391,7 @@ <h1 id="index">Index</h1>

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2 changes: 1 addition & 1 deletion index.html
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Expand Up @@ -561,7 +561,7 @@ <h1>Increase citations, ease review &amp; foster collaboration<a class="headerli

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2 changes: 1 addition & 1 deletion legal/privacy-policy.html
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Expand Up @@ -533,7 +533,7 @@ <h2>Consent<a class="headerlink" href="#consent" title="Permalink to this headin

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2 changes: 1 addition & 1 deletion legal/terms-conditions.html
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Expand Up @@ -586,7 +586,7 @@ <h2>Disclaimer<a class="headerlink" href="#disclaimer" title="Permalink to this

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2 changes: 1 addition & 1 deletion motivation/collaboration.html
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Expand Up @@ -603,7 +603,7 @@ <h2>Ablation Studies<a class="headerlink" href="#ablation-studies" title="Permal

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2 changes: 1 addition & 1 deletion motivation/increase-citations.html
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Expand Up @@ -542,7 +542,7 @@ <h2>Testing<a class="headerlink" href="#testing" title="Permalink to this headin

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2 changes: 1 addition & 1 deletion motivation/review.html
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Expand Up @@ -537,7 +537,7 @@ <h2>Interpretability<a class="headerlink" href="#interpretability" title="Permal

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2 changes: 1 addition & 1 deletion motivation/why.html
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Expand Up @@ -487,7 +487,7 @@ <h1>Why make it reproducible?<a class="headerlink" href="#why-make-it-reproducib

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130 changes: 65 additions & 65 deletions notebooks/0-basic-data-prep-and-model.html
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Expand Up @@ -984,38 +984,38 @@ <h2>Machine Learning<a class="headerlink" href="#machine-learning" title="Permal
</thead>
<tbody>
<tr>
<th>59</th>
<td>37.6</td>
<td>19.1</td>
<td>194.0</td>
<td>MALE</td>
<th>337</th>
<td>46.8</td>
<td>16.5</td>
<td>189.0</td>
<td>FEMALE</td>
</tr>
<tr>
<th>243</th>
<td>52.2</td>
<td>17.1</td>
<td>228.0</td>
<td>MALE</td>
<th>200</th>
<td>44.9</td>
<td>13.3</td>
<td>213.0</td>
<td>FEMALE</td>
</tr>
<tr>
<th>191</th>
<td>48.7</td>
<td>15.7</td>
<td>208.0</td>
<td>MALE</td>
<th>302</th>
<td>50.5</td>
<td>18.4</td>
<td>200.0</td>
<td>FEMALE</td>
</tr>
<tr>
<th>164</th>
<td>45.5</td>
<td>13.7</td>
<td>214.0</td>
<td>FEMALE</td>
<th>86</th>
<td>36.3</td>
<td>19.5</td>
<td>190.0</td>
<td>MALE</td>
</tr>
<tr>
<th>280</th>
<td>52.7</td>
<td>19.8</td>
<td>197.0</td>
<th>299</th>
<td>50.6</td>
<td>19.4</td>
<td>193.0</td>
<td>MALE</td>
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<tr>
Expand All @@ -1026,38 +1026,38 @@ <h2>Machine Learning<a class="headerlink" href="#machine-learning" title="Permal
<td>...</td>
</tr>
<tr>
<th>144</th>
<td>37.3</td>
<td>16.8</td>
<td>192.0</td>
<th>279</th>
<td>45.4</td>
<td>18.7</td>
<td>188.0</td>
<td>FEMALE</td>
</tr>
<tr>
<th>223</th>
<td>46.4</td>
<td>15.6</td>
<td>221.0</td>
<th>239</th>
<td>51.3</td>
<td>14.2</td>
<td>218.0</td>
<td>MALE</td>
</tr>
<tr>
<th>68</th>
<td>35.9</td>
<td>16.6</td>
<td>190.0</td>
<td>FEMALE</td>
<th>313</th>
<td>52.0</td>
<td>20.7</td>
<td>210.0</td>
<td>MALE</td>
</tr>
<tr>
<th>334</th>
<td>50.2</td>
<td>18.8</td>
<td>202.0</td>
<th>7</th>
<td>39.2</td>
<td>19.6</td>
<td>195.0</td>
<td>MALE</td>
</tr>
<tr>
<th>135</th>
<td>41.1</td>
<td>17.5</td>
<td>190.0</td>
<th>181</th>
<td>50.0</td>
<td>15.3</td>
<td>220.0</td>
<td>MALE</td>
</tr>
</tbody>
Expand Down Expand Up @@ -1095,49 +1095,49 @@ <h2>Machine Learning<a class="headerlink" href="#machine-learning" title="Permal
</thead>
<tbody>
<tr>
<th>59</th>
<td>Adelie Penguin (Pygoscelis adeliae)</td>
<th>337</th>
<td>Chinstrap penguin (Pygoscelis antarctica)</td>
</tr>
<tr>
<th>243</th>
<th>200</th>
<td>Gentoo penguin (Pygoscelis papua)</td>
</tr>
<tr>
<th>191</th>
<td>Gentoo penguin (Pygoscelis papua)</td>
<th>302</th>
<td>Chinstrap penguin (Pygoscelis antarctica)</td>
</tr>
<tr>
<th>164</th>
<td>Gentoo penguin (Pygoscelis papua)</td>
<th>86</th>
<td>Adelie Penguin (Pygoscelis adeliae)</td>
</tr>
<tr>
<th>280</th>
<th>299</th>
<td>Chinstrap penguin (Pygoscelis antarctica)</td>
</tr>
<tr>
<th>...</th>
<td>...</td>
</tr>
<tr>
<th>144</th>
<td>Adelie Penguin (Pygoscelis adeliae)</td>
<th>279</th>
<td>Chinstrap penguin (Pygoscelis antarctica)</td>
</tr>
<tr>
<th>223</th>
<th>239</th>
<td>Gentoo penguin (Pygoscelis papua)</td>
</tr>
<tr>
<th>68</th>
<td>Adelie Penguin (Pygoscelis adeliae)</td>
</tr>
<tr>
<th>334</th>
<th>313</th>
<td>Chinstrap penguin (Pygoscelis antarctica)</td>
</tr>
<tr>
<th>135</th>
<th>7</th>
<td>Adelie Penguin (Pygoscelis adeliae)</td>
</tr>
<tr>
<th>181</th>
<td>Gentoo penguin (Pygoscelis papua)</td>
</tr>
</tbody>
</table>
<p>233 rows × 1 columns</p>
Expand Down Expand Up @@ -1264,7 +1264,7 @@ <h3>Model Training<a class="headerlink" href="#model-training" title="Permalink
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>0.9871244635193133
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>0.9914163090128756
</pre></div>
</div>
</div>
Expand All @@ -1278,7 +1278,7 @@ <h3>Model Training<a class="headerlink" href="#model-training" title="Permalink
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>0.9900990099009901
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>0.9801980198019802
</pre></div>
</div>
</div>
Expand Down Expand Up @@ -1383,7 +1383,7 @@ <h3>Model Training<a class="headerlink" href="#model-training" title="Permalink

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6 changes: 3 additions & 3 deletions notebooks/1-model-evaluation.html
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Expand Up @@ -1146,8 +1146,8 @@ <h2><span class="section-number">1.3.5. </span>Choosing the appropriate Evaluati
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</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>{&#39;fit_time&#39;: array([0.00573683, 0.00520396, 0.00519919, 0.00517201, 0.00513029]),
&#39;score_time&#39;: array([0.00434804, 0.00401068, 0.00399303, 0.00412226, 0.00395799]),
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>{&#39;fit_time&#39;: array([0.00715613, 0.00695634, 0.00678277, 0.00684142, 0.00682783]),
&#39;score_time&#39;: array([0.0054667 , 0.0051136 , 0.00542235, 0.00538588, 0.00574827]),
&#39;test_MCC&#39;: array([0.37796447, 0.27863911, 0.40824829, 0.02424643, 0.08625819]),
&#39;test_ACC&#39;: array([0.73333333, 0.7 , 0.76666667, 0.66666667, 0.62068966])}
</pre></div>
Expand Down Expand Up @@ -1366,7 +1366,7 @@ <h2><span class="section-number">1.3.8. </span>Conclusion<a class="headerlink" h

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2 changes: 1 addition & 1 deletion notebooks/2-benchmarking.html
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Expand Up @@ -867,7 +867,7 @@ <h2><span class="section-number">2.3.4. </span>Linear and Standard Models<a clas

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2 changes: 1 addition & 1 deletion notebooks/3-model-sharing.html
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Expand Up @@ -850,7 +850,7 @@ <h2><span class="section-number">3.3.5. </span>Docker for ultimate reproducibili

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2 changes: 1 addition & 1 deletion notebooks/4-testing.html
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Expand Up @@ -1250,7 +1250,7 @@ <h2><span class="section-number">4.4.4. </span>Input Data Validation<a class="he

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