Skip to content

Free software for research of super-resolution imaging.

Notifications You must be signed in to change notification settings

JipengYan1995/SRUSSoftware

Repository files navigation

SRUS Software Version 2.4

If you watch this repository, you can be notified of updates.

If you find long and straight lines after tracking, please check if the "max blood flow speed (unit: m/s)" is set too large and try smaller value to it.

Interface

Load Data / Quick Run / Motion Correction

Interface1

Localisation / Tracking / Plotting

Interface2

Parameter Calculation / Animation Generation

Interface3

License

Before downloading and using the software, you accept all the terms contained in the End User License Agreement.

Contact Information

Author: Jipeng Yan, Meng-Xing Tang.

Ultrasound Lab for Sensing and Imaging, Department of Bioengineering, Imperial College London.

Feedbacks, questions, and requirements about Software: Jipeng Yan (j.yan19@imperial.ac.uk, jipeng_yan@163.com)

Rights, collaborations, and others to Meng-Xing Tang (mengxing.tang@imperial.ac.uk)

How to use

Graphical guides can be found in User Guide.

Brief description of software can be found in Software Description.

Sample Data

Ex vivo pig heart: https://doi.org/10.6084/m9.figshare.22331635

In vivo human heart: https://doi.org/10.5281/zenodo.11096558

Academic reference to be cited:

  1. Jipeng Yan, Tao Zhang, Jacob Broughton-Venner, Pintong Huang, Meng-Xing Tang. Super-Resolution Ultrasound Through Sparsity-Based Deconvolution and Multi-Feature Tracking, IEEE Transactions on Medical Imaging, 2022. DOI: 10.1109/TMI.2022.3152396

  2. Jipeng Yan, Biao Huang, Johanna Tonko, Matthieu Toulemonde, Joseph Hansen-Shearer, Qingyuan Tan, Kai Riemer, Konstantinos Ntagiantas, Rasheda A Chowdhury, Pier D Lambiase, Roxy Senior, Meng-Xing Tang. Transthoracic Ultrasound Localization Microscopy of Myocardial Vasculature in Patients, Nature Biomedical Engineering, 2024. DOI: 10.1038/s41551-024-01206-6

Acknowledgement

Thanks for insightful suggestions/feedbacks from Prof. Yuanyi Zheng, Prof. Pintong Huang, Prof. Christopher W Dunsby, Dr. Tao Zhang, Mr. Joseph Hansen-Shearer Dr. Matthieu Toulemonde, Dr. Channa Jayasena, Mrs. Nikoleta Papanikolaou, Mr. Biao Huang, Dr. Su Yan and Mrs. Maoyao Li.

Updates from Version 2.3 to 2.4

GUI 2.3->2.4 Motion Correction 2.0->2.1 Background Removal 2.0-> 2.1 Parameter Calculation 2.1 ->2.2

More details about updates can be found at the end of the User Guide.