merge GraphRecipes & StatsPlots into monorepo - fix docs build (#…

…5000)

.github/workflows/ci.yml

@@ -64,20 +64,27 @@ jobs:
 
       - uses: julia-actions/cache@v2
 
-      - name: Develop RecipesBase, RecipesPipeline, PlotsBase, Plots
+      - name: Develop all Plots packages
         env:
           JULIA_PKG_PRECOMPILE_AUTO: 0
         shell: julia --color=yes {0}
         run: |
           using Pkg
-          foreach(path -> Pkg.develop(; path), ("./RecipesBase", "./RecipesPipeline", "./PlotsBase", "."))
+          Pkg.develop([
+            (; path="./RecipesBase"),
+            (; path="./RecipesPipeline"),
+            (; path="./PlotsBase"),
+            (; path="."),
+            (; path="./GraphRecipes"),
+            (; path="./StatsPlots"),
+          ])
 
       - name: Install conda based matplotlib
         env:
           JULIA_PKG_PRECOMPILE_AUTO: 0
         run: julia --color=yes ci/matplotlib.jl
 
-      - name: Test RecipesBase, RecipesPipeline, PlotsBase, Plots
+      - name: Test all Plots packages
         timeout-minutes: 60
         run: |
           cmd=(julia --color=yes)
@@ -87,13 +94,9 @@ jobs:
           echo ${cmd[@]}
           ${cmd[@]} -e '
             using Pkg
-            foreach(name -> Pkg.test(name; coverage=true), ("RecipesBase", "RecipesPipeline", "PlotsBase", "Plots"))
+            Pkg.test(["GraphRecipes", "StatsPlots"]; coverage=true)
+            Pkg.test(["RecipesBase", "RecipesPipeline", "PlotsBase", "Plots"]; coverage=true)
           '
-      - name: Test downstream packages
-        if: startsWith(matrix.os, 'ubuntu')
-        run: |
-          xvfb-run julia --color=yes ci/downstream.jl GraphRecipes || true
-          xvfb-run julia --color=yes ci/downstream.jl StatsPlots || true
 
       - uses: julia-actions/julia-processcoverage@latest
         if: startsWith(matrix.os, 'ubuntu')

.github/workflows/format_check.yml

@@ -25,7 +25,7 @@ jobs:
       - name: Format Julia files
         run: |
           using JuliaFormatter
-          format(["RecipesBase", "RecipesPipeline", "PlotsBase", "src", "test"])
+          format(["RecipesBase", "RecipesPipeline", "PlotsBase", "src", "test", "GraphRecipes", "StatsPlots"])
         shell: julia --color=yes --compile=min -O0 {0}
 
       - name: suggester / JuliaFormatter

GraphRecipes/LICENSE.md

@@ -0,0 +1,22 @@
+The GraphRecipes.jl package is licensed under the MIT "Expat" License:
+
+> Copyright (c) 2016: Thomas Breloff.
+>
+> Permission is hereby granted, free of charge, to any person obtaining
+> a copy of this software and associated documentation files (the
+> "Software"), to deal in the Software without restriction, including
+> without limitation the rights to use, copy, modify, merge, publish,
+> distribute, sublicense, and/or sell copies of the Software, and to
+> permit persons to whom the Software is furnished to do so, subject to
+> the following conditions:
+>
+> The above copyright notice and this permission notice shall be
+> included in all copies or substantial portions of the Software.
+>
+> THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+> EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+> MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+> IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+> CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+> TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+> SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

GraphRecipes/Project.toml

@@ -0,0 +1,45 @@
+name = "GraphRecipes"
+uuid = "bd48cda9-67a9-57be-86fa-5b3c104eda73"
+version = "1.0"
+
+[deps]
+AbstractTrees = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
+GeometryTypes = "4d00f742-c7ba-57c2-abde-4428a4b178cb"
+Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
+InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
+Interpolations = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
+LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
+NaNMath = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
+NetworkLayout = "46757867-2c16-5918-afeb-47bfcb05e46a"
+PlotUtils = "995b91a9-d308-5afd-9ec6-746e21dbc043"
+RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
+SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
+Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
+
+[compat]
+AbstractTrees = "0.4"
+GeometryTypes = "0.8"
+Graphs = "1.7"
+Interpolations = "0.13 - 0.15"
+NaNMath = "1"
+NetworkLayout = "0.4"
+PlotUtils = "0.6.2, 1"
+RecipesBase = "1"
+Statistics = "1"
+julia = "1.10"
+
+[extras]
+Gtk = "4c0ca9eb-093a-5379-98c5-f87ac0bbbf44"
+ImageMagick = "6218d12a-5da1-5696-b52f-db25d2ecc6d1"
+LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
+Logging = "56ddb016-857b-54e1-b83d-db4d58db5568"
+Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a"
+Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
+StableRNGs = "860ef19b-820b-49d6-a774-d7a799459cd3"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+VisualRegressionTests = "34922c18-7c2a-561c-bac1-01e79b2c4c92"
+
+[targets]
+test = ["Gtk", "ImageMagick", "LinearAlgebra", "Logging", "Markdown", "Plots", "Random", "SparseArrays", "StableRNGs", "Test", "VisualRegressionTests"]

GraphRecipes/README.md

@@ -0,0 +1,44 @@
+[gh-ci-img]: https://github.com/JuliaPlots/GraphRecipes.jl/workflows/ci/badge.svg?branch=master
+[gh-ci-url]: https://github.com/JuliaPlots/GraphRecipes.jl/actions?query=workflow%3Aci
+
+# GraphRecipes
+The repository formerly known as PlotRecipes
+
+[![Build Status][gh-ci-img]][gh-ci-url]
+[![Documentation](https://img.shields.io/badge/docs-stable-blue.svg)](https://docs.juliaplots.org/stable/GraphRecipes/introduction)
+[![project chat](https://img.shields.io/badge/zulip-join_chat-brightgreen.svg)](https://julialang.zulipchat.com/#narrow/stream/236493-plots)
+
+## Summary
+In this repository, a graph is a network of connected nodes (although sometimes people use the same word to refer to a plot). If you want to do plotting, then use [Plots.jl](https://github.com/JuliaPlots/Plots.jl).
+
+For a given graph, there are many legitimate ways to display and visualize the graph. However, some graph layouts will convey the structure of the underlying graph much more clearly than other layouts. GraphRecipes provides many options for producing graph layouts including  (un)directed graphs, tree graphs and arc/chord diagrams. For each layout type the `graphplot` function will try to create a default layout that optimizes visual clarity. However, the user can tweak the default layout through a large number of powerful keyword arguments, see the [documentation](https://docs.juliaplots.org/stable/GraphRecipes/introduction) for more details and some examples.
+
+## Installation
+```julia
+] add GraphRecipes
+```
+
+## An example
+```julia
+using GraphRecipes
+using Plots
+
+g = [0 1 1;
+     1 0 1;
+     1 1 0]
+
+graphplot(g,
+          x=[0,-1/tan(π/3),1/tan(π/3)], y=[1,0,0],
+          nodeshape=:circle, nodesize=1.1,
+          axis_buffer=0.6,
+          curves=false,
+          color=:black,
+          nodecolor=[colorant"#389826",colorant"#CB3C33",colorant"#9558B2"],
+          linewidth=10)
+```
+![](assets/readme_julia_logo_pun.png)
+
+
+This repo maintains a collection of recipes for graph analysis, and is a reduced and refactored version of the previous PlotRecipes. It uses the powerful machinery of [Plots](https://github.com/JuliPlots/Plots.jl) and [RecipesBase](https://github.com/JuliaPlots/Plots.jl/tree/master/RecipesBase) to turn simple transformations into flexible visualizations.
+
+Original author: Thomas Breloff (@tbreloff)

GraphRecipes/src/GraphRecipes.jl

@@ -0,0 +1,24 @@
+module GraphRecipes
+
+using Graphs
+using PlotUtils         # ColorGradient
+using RecipesBase
+
+using InteractiveUtils  # subtypes
+using LinearAlgebra
+using SparseArrays
+using Statistics
+using NaNMath
+using GeometryTypes
+using Interpolations
+
+import NetworkLayout
+import Graphs: rng_from_rng_or_seed
+
+include("utils.jl")
+include("graph_layouts.jl")
+include("graphs.jl")
+include("misc.jl")
+include("trees.jl")
+
+end