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remove description of phyloseq_to_ampvis2 from FAQ
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Kasper Skytte Andersen committed Sep 12, 2023
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15 changes: 0 additions & 15 deletions vignettes/faq.Rmd
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Expand Up @@ -37,18 +37,3 @@ amp_ordinate(ampvis2_object,
transform = "none",
distmeasure = "none")
```

## Loading phyloseq objects
Simply source the `phyloseq_to_ampvis2()` function from [this gist](https://gist.github.com/KasperSkytte/8d0ca4206a66be7ff6d76fc4ab8e66c6), either by copy/pasting into R, or by using `devtools::source_gist()` as shown below. You need both the `phyloseq` and `ampvis2` packages installed for it to work.

```{r, eval = FALSE}
#require the devtools package to source gist
if(!require("devtools"))
install.packages("devtools")
#source the phyloseq_to_ampvis2() function from the gist
devtools::source_gist("8d0ca4206a66be7ff6d76fc4ab8e66c6")
#go converty
ampvis2_obj <- phyloseq_to_ampvis2(phyloseq_obj)
```

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