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@KellisLab

MIT CompBio Group

Manolis Kellis Lab at MIT and Broad Institute

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  1. scdemon scdemon Public

    single-cell decorrelated module networks

    Python 28 1

  2. AD_regulome_analysis AD_regulome_analysis Public

    AD regulome analysis

    R 13 3

  3. benj benj Public

    benj benj benj

    Python 5 1

  4. scCancer scCancer Public

    metastatic melanoma project

    Jupyter Notebook 4 1

  5. epiclust epiclust Public

    Python 4 2

  6. miBrain miBrain Public

    R 3

Repositories

Showing 10 of 25 repositories
  • auto-meeting-minutes Public
    KellisLab/auto-meeting-minutes’s past year of commit activity
    Python 0 2 0 4 Updated Nov 4, 2025
  • evolutionDeepLearning Public

    Analysis scripts associated with "Deep learning predicts cis-regulatory turnover in human evolution". Mangan et al, BioRxiv 2025.

    KellisLab/evolutionDeepLearning’s past year of commit activity
    R 1 BSD-3-Clause 0 0 0 Updated Oct 31, 2025
  • banksy-hd Public

    BANKSY for high dimensional spatial transcriptomics (like Visium HD)

    KellisLab/banksy-hd’s past year of commit activity
    Python 3 GPL-3.0 0 0 0 Updated Oct 24, 2025
  • actionet-r Public
    KellisLab/actionet-r’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Oct 13, 2025
  • libactionet Public
    KellisLab/libactionet’s past year of commit activity
    C++ 0 AGPL-3.0 0 0 0 Updated Oct 9, 2025
  • benj Public

    benj benj benj

    KellisLab/benj’s past year of commit activity
    Python 5 GPL-3.0 1 0 0 Updated Oct 2, 2025
  • deg-pipeline Public
    KellisLab/deg-pipeline’s past year of commit activity
    R 0 0 0 0 Updated Oct 1, 2025
  • Mantis-Discord-Bot Public
    KellisLab/Mantis-Discord-Bot’s past year of commit activity
    Python 0 0 2 0 Updated Sep 26, 2025
  • Mantis_SDK Public
    KellisLab/Mantis_SDK’s past year of commit activity
    Python 3 1 0 1 Updated Sep 25, 2025
  • MantisExtensions Public
    KellisLab/MantisExtensions’s past year of commit activity
    TypeScript 1 4 3 6 Updated Sep 22, 2025
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