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@KlugerLab

Kluger Lab

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  1. FIt-SNE FIt-SNE Public

    Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    C++ 605 111

  2. SpectralNet SpectralNet Public

    Deep network that performs spectral clustering

    Python 328 103

  3. ALRA ALRA Public

    Imputation method for scRNA-seq based on low-rank approximation

    R 77 22

  4. GeneTrajectory GeneTrajectory Public

    R implementation of GeneTrajectory

    R 65 10

  5. t-SNE-Heatmaps t-SNE-Heatmaps Public

    Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq

    R 48 11

  6. pyFIt-SNE pyFIt-SNE Public

    Python Wrapper for FIt-SNE

    C++ 45 11

Repositories

Showing 10 of 37 repositories
  • MOSAIC Public
    KlugerLab/MOSAIC’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 21, 2025
  • DiCoLo Public
    KlugerLab/DiCoLo’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 7, 2025
  • ViralDetection Public

    This pipeline processes sequencing data to identify viral integrations.

    KlugerLab/ViralDetection’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 29, 2025
  • KlugerLab/DysonEqualizer’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Oct 16, 2025
  • bipca Public

    Biwhitened PCA

    KlugerLab/bipca’s past year of commit activity
    Jupyter Notebook 13 0 1 1 Updated Sep 21, 2025
  • SORBET Public
    KlugerLab/SORBET’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Aug 7, 2025
  • SIMVI Public
    KlugerLab/SIMVI’s past year of commit activity
    Jupyter Notebook 15 BSD-3-Clause 0 2 0 Updated Jun 27, 2025
  • KlugerLab/LocalizedMarkerDetector’s past year of commit activity
    R 1 0 1 0 Updated Jun 13, 2025
  • KlugerLab/Y-SCORCH_manuscript’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 8, 2025
  • KlugerLab/bipca-experiment’s past year of commit activity
    Python 0 0 0 0 Updated Feb 2, 2025

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