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Update AlphaPulldown_manual.md
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dingquanyu authored Jul 2, 2024
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Proceed to the next step [2.1 Basic Run](#21-basic-run).
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### 1.4. Run with custom templates (TrueMultimer)
<summary>
1.4. Run with custom templates (TrueMultimer)
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Instead of using the default search through the PDB database for structural templates, you can provide a custom database. AlphaPulldown supports a feature called "True Multimer," which allows AlphaFold to use multi-chain structural templates during the prediction process. This can be beneficial for protein complexes where the arrangement of the chains may vary.

#### Input
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