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v1.0.0

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@jjti jjti released this 05 Jun 23:20
· 19 commits to master since this release
11e4dbf

What's Changed

  • Modernize, modularize by @jjtimmons in #5

Breaking

  • --igem, --addgene, and --dnasu flags are removed
  • embedded primer3 and blast binaries are removed (all of /vendor)
  • removed all attempts/references to supporting Windows from the docs. I'm sure it still works fine, but it's easier to pretend everything is Unix

Added

  • repp add db to add FASTA file sequence databases to persistent storage. repp only uses FASTA dbs that are added via this cmd
  • --dbs flag behavior. Eg repp make seq --dbs igem,addgene,freezer to use a set of dbs during runs. Default: use all dbs
  • A Docker-based CLI and example for running repp as an image. Benefit: pre-installed blast/primer3 binaries, no installing Go

Changed

  • JSON feature/enzyme config files, embedded with repp binary until first run then written to ~/.repp
  • Updated go version
  • Beginning of some semblance of logging (incredible amount to be desired, still)

Full Changelog: v0.1.0...v1.0.0