change logo, add banner and set up folder structure

_config.yml

@@ -8,7 +8,7 @@
 title: Introduction to spatial Data Science # The title of the book. Will be placed in the left navbar.
 author: Bernardin LIGAN # The author of the book
 copyright: "2024" # Copyright year to be placed in the footer
-logo: africitizen_logo.jpeg # A path to the book logo
+logo: course_logo.jpg # A path to the book logo
 # Patterns to skip when building the book. Can be glob-style (e.g. "*skip.ipynb")
 exclude_patterns: [_build, Thumbs.db, .DS_Store, "**.ipynb_checkpoints"]
 # Auto-exclude files not in the toc
@@ -19,13 +19,14 @@ only_build_toc_files: true
 execute:
   execute_notebooks: "auto" # Whether to execute notebooks at build time. Must be one of ("auto", "force", "cache", "off")
   cache: "" # A path to the jupyter cache that will be used to store execution artifacts. Defaults to `_build/.jupyter_cache/`
-  exclude_patterns: [] # A list of patterns to *skip* in execution (e.g. a notebook that takes a really long time)
+  exclude_patterns: [book/markdown.md,book/notebook.md] # A list of patterns to *skip* in execution (e.g. a notebook that takes a really long time)
   timeout: 100 # The maximum time (in seconds) each notebook cell is allowed to run.
   run_in_temp:
     false # If `True`, then a temporary directory will be created and used as the command working directory (cwd),
     # otherwise the notebook's parent directory will be the cwd.
   allow_errors: false # If `False`, when a code cell raises an error the execution is stopped, otherwise all cells are always run.
   stderr_output: show # One of 'show', 'remove', 'remove-warn', 'warn', 'error', 'severe'
+  only_build_toc_files: true # Only execute files that are in the Table of Contents
 
 launch_buttons:
   colab_url: "https://colab.research.google.com"
@@ -41,12 +42,13 @@ repository:
 # Add GitHub buttons to your book
 # See https://jupyterbook.org/customize/config.html#add-a-link-to-your-repository
 html:
-  favicon: "fav.ico"
+  favicon: "favicon.ico"
   baseurl: https://LiganiumInc.github.io/introduction-to-spatial-data-science # The base URL where your book will be hosted.
   use_repository_button: true
   use_issues_button: true
   use_edit_page_button: true
   use_download_button: true
+  use_multitoc_numbering: false
   # thebe: true
   # google_analytics_id: G-XXXXXXX
 

_toc.yml

@@ -3,20 +3,32 @@
 
 format: jb-book
 root: index
-chapters:
-  - file: book/markdown
-  - file: book/notebooks
-  - file: book/bibliography
-
-# Or you organize the TOC by parts
-
-# parts:
-#   - caption: Chapters
-#     numbered: true
-#     maxdepth: 2
-#     chapters:
-#       - file: book/markdown
-#       - file: book/notebooks
-#   - caption: Appendices
-#     chapters:
-#       - file: book/bibliography
+parts:
+  - caption: Course Informations
+    numbered: true
+    # maxdepth: 2
+    chapters:
+      - file: book/course-info/general
+      - file: book/course-info/course_author
+      - file: book/course-info/acknowledgements
+      - file: book/course-info/objectives
+      - file: book/course-info/requirements
+      - file: book/course-info/environment
+      - file: book/course-info/resources
+      - file: book/course-info/licences
+      - file: book/course-info/faq   
+  - caption: Lesson1
+    numbered: true
+    chapters:
+      - file: book/lessons/lesson1/overview
+  - caption: Lesson2
+    numbered: true
+    chapters:
+      - file: book/lessons/lesson2/overview
+  - caption: Lesson3  
+    numbered: true
+    chapters:
+      - file: book/lessons/lesson3/overview
+  - caption: Appendices
+    chapters:
+      - file: book/bibliography

book/course-info/acknowledgements.md

@@ -0,0 +1 @@
+# Acknoledgements

book/course-info/course_author.md

@@ -0,0 +1 @@
+# About the Author

book/course-info/environment.md

@@ -0,0 +1,5 @@
+# Setup Coding Environment
+
+<!-- 
+```{contents}
+``` -->

book/course-info/faq.md

@@ -0,0 +1 @@
+# FAQ

book/course-info/general.md

@@ -0,0 +1 @@
+# General Information

book/course-info/licences.md

@@ -0,0 +1 @@
+# License and Terms of Use

book/course-info/objectives.md

@@ -0,0 +1 @@
+# Objectives of the course

book/course-info/requirements.md

@@ -0,0 +1,2 @@
+# Course Requirements
+

book/course-info/resources.md

@@ -0,0 +1 @@
+# Resources 

book/lessons/lesson1/overview.md

@@ -0,0 +1,5 @@
+# Overview
+
+In this lesson .....
+
+## Lessons Goals

book/lessons/lesson2/overview.md

@@ -0,0 +1,5 @@
+# Overview
+
+In this lesson .....
+
+## Lessons Goals

book/lessons/lesson3/overview.md

@@ -0,0 +1,5 @@
+# Overview
+
+In this lesson .....
+
+## Lessons Goals

index.md

@@ -1,8 +1,13 @@
-# Welcome to your Jupyter Book
+# Introduction to Spatial Data Science
 
 This is a small sample book to give you a feel for how book content is
 structured.
 
+![banner](banner.jpg)
+
+```{tableofcontents}
+```
+
 :::{note}
 Here is a note!
 :::