0.5.0

What's Changed

• Add error message for single-led with wrong parameters by @samuelbray32 in #680
• positionVideo debug by @samuelbray32 in #687
• Limited scope docs PR by @CBroz1 in #690
• Make artifact interval a 2d array by @samuelbray32 in #691
• Implement pre-commit, refactor input validation by @CBroz1 in #688
• Linearizationv1 debug and tutorial by @samuelbray32 in #695
• Mixin class by @CBroz1 in #692
• Changed SpyglassMixin to be imported from dj_mixin rather than dj_hel… by @sharon-chiang in #696
• added Path library to imports by @sharon-chiang in #697
• Spike sorting v1 pipeline by @khl02007 in #651
• Change CurationV1.insert_metric_curation to include metric_curation_id in description field to faciliate provenance checking by @khl02007 in #704
• Lfp band fixes by @samuelbray32 in #706
• Make sampling rate for LFP user-defined instead of hard-coded to 1000 Hz by @sharon-chiang in #705
• Delete downstream restriction fix by @CBroz1 in #703
• Prevent Curation from re-adding an existing sorting key with a new cu… by @samuelbray32 in #670
• Dlc debug by @emreybroyles in #702
• add remove_existing_folder argument by @samuelbray32 in #708
• Add cautious delete mixin by @CBroz1 in #711
• Hotfix for attrib error __ -> _nwb_table_dict by @CBroz1 in #714
• Fix ref channel append error by @khl02007 in #720
• Avoid bug in spikeinterface for low spikecounts by @samuelbray32 in #721
• Change method of defining base dir in get_abs_path by @samuelbray32 in #715
• Env variables for DLC by @CBroz1 in #722
• Add mkdir to pass pytests by @CBroz1 in #723
• Priority for fetch_nwb function in merge tables by @samuelbray32 in #724
• Handle single intervals in spike sorting by @edeno in #726
• Handle sortings in which no units are detected (SpikeSortingV1) by @khl02007 in #728
• Helper function for adding data to kachery by @samuelbray32 in #729
• V0 migration model, revised by @CBroz1 in #717
• print -> logger by @CBroz1 in #730
• #732 by @CBroz1 in #734
• Add detail to sharing notebook by @samuelbray32 in #735
• Check for upsampled data in trodes fetch dataframe by @samuelbray32 in #741
• Remove logger.info() without message by @edeno in #747
• Fix PositionOutput.fetch1_dataframe bug by @samuelbray32 in #746
• Remove old delete method from SpikeSorting table of V0 pipeline by @khl02007 in #751
• Move figurl_views to spike sorting v0 by @khl02007 in #750
• Decoding pipeline by @edeno in #731
• Interval list types by @samuelbray32 in #742
• Dlc debug: smoothing_duration fix by @emreybroyles in #753
• restrict get position info by session name by @samuelbray32 in #757
• Restrict UnitWaveformFeaturesGroup and SortedSpikesGroup by nwb_file_name by @edeno in #758
• Fix the length of object_id for ImportedSpikeSorting by @khl02007 in #760
• Fix SpikeSortingOutput get_recording and get_sorting by @edeno in #761
• Print session/exp summary, fix lfp target sample fetch by @CBroz1 in #762
• Update LFP notebook by @samuelbray32 in #764
• Use PositionOutput to get data in example notebook by @samuelbray32 in #765
• Comment out video section for mini-rec in Update 20_Position_Trodes.ipynb by @edeno in #767
• Handle numpy arrays in create_lfp_electrode_group by @edeno in #766
• Pytest revamp by @CBroz1 in #743
• Minor decoding fixes by @edeno in #769
• DLC notebooks 21 and 22 by @emreybroyles in #772
• Docs fixes for decoding pipeline by @CBroz1 in #776
• Add new function to retrieve spatial series from NWB file by @khl02007 in #777
• Add overview to docs by @edeno in #779
• LFPV1 interval insert by @samuelbray32 in #775
• Proofing and minor edits to Tutorial notebooks 11-32 by @samuelbray32 in #796
• Update 01_Insert_Data.ipynb by @magland in #802
• Decoding pipeline edits for imported data by @edeno in #782
• Blackify 24.1.1 by @CBroz1 in #808
• More robust delete_downstream_merge by @CBroz1 in #806
• Address join-compatibility issue for long chains by @CBroz1 in #811
• Filtering units for decoding by @edeno in #807
• Cautious delete bugfixes by @CBroz1 in #821
• Revise dependencies by @CBroz1 in #822
• Minor decoding fixes by @edeno in #819
• Update waveform_features.py by @MichaelCoulter in #813
• Fault-permit insert and remove mutual exclusivity protections on Merge by @CBroz1 in #824
• Update CITATION.cff by @edeno in #826

New Contributors

• @sharon-chiang made their first contribution in #696 🎉
• @emreybroyles made their first contribution in #702 🎉

Full Changelog: 0.4.3...0.5.0

See also CHANGELOG.md