pyAPES (Atmosphere-PlantEcosystem Simulator in pure Python)

Master code, working towards publishable code & model description paper in GMD (Tikkasalo et al. 2025)

Recent changes:

1. revised package structure, renamed packages
2. typing, documenting interfaces
3. Sphinx-integration for online-documentation

ToDo's:

1. implement soil water bucket model (from SpaFhy-style)
2. Notebooks for package-level demonstrations (user guide, case-examples for GMD)
3. add checks on installed modules

Current developments:

1. Sapflow and trunk water storage dynamics using 1D porous media approach (Opa)
2. Energy-balance based snow scheme FSM (J-P)
3. 13C, 18O and 3H isotopes (Kersti)