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Add GPU support to MRIReco.jl #182

Merged
merged 66 commits into from
Aug 13, 2024
Merged

Add GPU support to MRIReco.jl #182

merged 66 commits into from
Aug 13, 2024

Commits on Apr 17, 2024

  1. Update RegLS calls

    @nHackel
    nHackel committed Apr 17, 2024
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  2. Add S kwarg to SparseOp

    @nHackel
    nHackel committed Apr 17, 2024
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  3. Fix NFFTOp call, unsure if trajectory is passed on correctly

    @nHackel
    nHackel committed Apr 17, 2024
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  4. Add :arrayType to param dict

    @nHackel
    nHackel committed Apr 17, 2024
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  5. Init working GPU reconstruction_simple

    @nHackel
    nHackel committed Apr 17, 2024
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Commits on Apr 18, 2024

  1. Remove CompositeOp

    @nHackel
    nHackel committed Apr 18, 2024
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  2. Fix NFFTOp nodes retrieval from Trajectory

    @nHackel
    nHackel committed Apr 18, 2024
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  3. Fix SparseOp

    @nHackel
    nHackel committed Apr 18, 2024
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  4. Fix missing type conversion for default Cartesian3D trajectory

    @nHackel
    nHackel committed Apr 18, 2024
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  5. Remove CompOp include

    @nHackel
    nHackel committed Apr 18, 2024
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  6. Init ExplicitOp for GPU

    @nHackel
    nHackel committed Apr 18, 2024
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  7. ctprod for ExplicitOp on GPU

    @nHackel
    nHackel committed Apr 18, 2024
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Commits on Apr 22, 2024

  1. Add GPU support to SubspaceOp

    @nHackel
    nHackel committed Apr 22, 2024
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  2. Add S kwarg to MapSliceOp

    @nHackel
    nHackel committed Apr 22, 2024
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  3. Add GPU support to circulaShutter!

    @nHackel
    nHackel committed Apr 22, 2024
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  4. Migrate DiagOp to LinearOpCollection, "overwrite" products with @Floop … 

    …loops for dense vectors
    @nHackel
    nHackel committed Apr 22, 2024
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  5. Add S kwarg to EncodingOps

    @nHackel
    nHackel committed Apr 22, 2024
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Commits on Apr 23, 2024

  1. Chose @floop executor based on arraytype

    @nHackel
    nHackel committed Apr 23, 2024
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  2. Add GPU support for SensitivityOp

    @nHackel
    nHackel committed Apr 23, 2024
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  3. Fix missing commas in EncodingOps

    @nHackel
    nHackel committed Apr 23, 2024
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  4. Adapt to function name change for DiagOp

    @nHackel
    nHackel committed Apr 23, 2024
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Commits on Apr 24, 2024

  1. Add operatore copy function as kwarg

    @nHackel
    nHackel committed Apr 24, 2024
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  2. Pass along FFTParams to operators based on array type

    @nHackel
    nHackel committed Apr 24, 2024
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  3. Fix GPU FFT params

    @nHackel
    nHackel committed Apr 24, 2024
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  4. Hide copyOpsFn for encoding params

    @nHackel
    nHackel committed Apr 24, 2024
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  5. Remove debug for-loop limits for multi_coil reco

    @nHackel
    nHackel committed Apr 24, 2024
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Commits on Apr 25, 2024

  1. Impore arrayType param handling

    @nHackel
    nHackel committed Apr 25, 2024
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  2. Remove (broken) default Wavelet sparsityTrafo

    @nHackel
    nHackel committed Apr 25, 2024
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  3. Use copyto! for better GPU performance

    @nHackel
    nHackel committed Apr 25, 2024
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Commits on May 22, 2024

  1. Remove log message

    @nHackel
    nHackel committed May 22, 2024
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Commits on Jun 5, 2024

  1. Init updating FieldmapNFFTOp constructor for GPU

    @nHackel
    nHackel committed Jun 5, 2024
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  2. Reduce clutter in ExplicitOp constructor

    @nHackel
    nHackel committed Jun 5, 2024
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  3. Init updating MRIOperators tests

    @nHackel
    nHackel committed Jun 5, 2024
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Commits on Jun 6, 2024

  1. Add GPU support for FieldmapNFFTOp (not very optimized)

    @nHackel
    nHackel committed Jun 6, 2024
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  2. Add cuda tests for MRIOperators

    @nHackel
    nHackel committed Jun 6, 2024
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  3. Update fieldmapop copy

    @nHackel
    nHackel committed Jun 6, 2024
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  4. Add arrayTypes to MRIReco tests

    @nHackel
    nHackel committed Jun 6, 2024
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  5. Adapt to RegLS Kwargs renaming

    @nHackel
    nHackel committed Jun 6, 2024
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Commits on Jun 11, 2024

  1. Update DirectReco for GPU

    @nHackel
    nHackel committed Jun 11, 2024
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  2. Fix copy for FieldmapNFFTOp

    @nHackel
    nHackel committed Jun 11, 2024
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  3. Update arrayType parameter handling (lessen restriction to accept fun… 

    …ctions)
    @nHackel
    nHackel committed Jun 11, 2024
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  4. Move L_inv and SenseMaps to GPU

    @nHackel
    nHackel committed Jun 11, 2024
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  5. Init not-error-ing tests (still some failing)

    @nHackel
    nHackel committed Jun 11, 2024
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  6. Fix bug in ExplicitOp

    @nHackel
    nHackel committed Jun 11, 2024
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Commits on Jul 3, 2024

  1. Add CUDA buildkite CI

    @nHackel
    nHackel committed Jul 3, 2024
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  2. Add AMD tests (inactive until NFFT runs on AMD)

    @nHackel
    nHackel committed Jul 3, 2024
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Commits on Jul 4, 2024

  1. Update RegLS and LinearOperatorColl. compat

    @nHackel
    nHackel committed Jul 4, 2024
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  2. Readd JLArray tests to MRIOperators

    @nHackel
    nHackel committed Jul 4, 2024
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  3. Add JLArray test to MRIReco

    @nHackel
    nHackel committed Jul 4, 2024
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Commits on Jul 9, 2024

  1. Attempt to run buildkite for MRIOperators

    @nHackel
    nHackel committed Jul 9, 2024
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  2. Merge branch 'master' into nh/gpuSupport

    @nHackel
    nHackel committed Jul 9, 2024
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  3. prepare project.toml for releases

    @nHackel
    nHackel committed Jul 9, 2024
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Commits on Jul 31, 2024

  1. Fix MRIOperators dep in MRISimulation

    @nHackel
    nHackel committed Jul 31, 2024
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  2. Try fix CUDA buildkite

    @nHackel
    nHackel committed Jul 31, 2024
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  3. Try to fix CI by dev'ing all packages in one call

    @nHackel
    nHackel committed Jul 31, 2024
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  4. Remove CuNFFT from CUDA test

    @nHackel
    nHackel committed Jul 31, 2024
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  5. Update CUDA and ROCM test files for GPU support

    @nHackel
    nHackel committed Jul 31, 2024
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  6. Merge branch 'master' into nh/gpuSupport

    @nHackel
    nHackel authored Jul 31, 2024
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  7. Merge branch 'nh/gpuSupport' of github.com:MagneticResonanceImaging/M… 

    …RIReco.jl into nh/gpuSupport
    @nHackel
    nHackel committed Jul 31, 2024
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  8. Ignore empty plans in FieldMapNFFTOp constructor

    @nHackel
    nHackel committed Jul 31, 2024
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  9. Use Adapt for MRIOperator constructors

    @nHackel
    nHackel committed Jul 31, 2024
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  10. Try fixing MRIOperators buildkite

    @nHackel
    nHackel committed Jul 31, 2024
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Commits on Aug 1, 2024

  1. Update MRIOperators import in runtests.jl

    @nHackel
    nHackel committed Aug 1, 2024
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  2. Use MRIOperators test env in buildkite

    @nHackel
    nHackel committed Aug 1, 2024
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  3. Activate AMD MRIOperators buildkite step

    @nHackel
    nHackel committed Aug 1, 2024
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  4. Fix whitespace in pipeline.yml

    @nHackel
    nHackel committed Aug 1, 2024
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