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Brain Dynamics Toolbox (Heitmann & Breakspear 2016, 2017, 2018)

modeldb.science/239388

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
HandbookSample2018a.pdf		HandbookSample2018a.pdf
bdtoolkit-2018a.zip		bdtoolkit-2018a.zip
readme.html		readme.html
screenshot.png		screenshot.png

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<html>
  The code for the book:<p/>
Handbook for the Brain Dynamics Toolbox: Version 2018a 
by Stewart Heitmann, Michael Breakspear
<a href="http://www.bdtoolbox.org">http://www.bdtoolbox.org/</a><p/>
Requires MATLAB and is documented and available for download from the above link<p/>
<p/>
Usage:<br/>
------<br/>
  <p/>
  After signing up for the newsletter you can download and extract the free toolbox from the above link.<br/>
  The first chapter from the book is also available for free.<p/>
  Following the advice in the documentation, On the MATLAB command prompt, cd to the folder that the archive was expanded into and execute the following commands:<p/>
<pre>
  cd bdtoolkit-2018a/
  addpath(pwd)
  cd models/
  addpath(pwd)
  savepath
  load HindmarshRose.mat sys
  bdGUI(sys);
</pre>
That should create a window which you can select Phase - > Portrait -> 3D to generate this image similar to one of the plots in Fig 1.1 in the first chapter:<p/>
<img src="./screenshot.png">
</html>