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Fixes for RNG #3

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Fixes for RNG #3

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9b458c9
Fixes for RNG
JCGoran Nov 13, 2024
1b9d606
Changelog
JCGoran Nov 25, 2024
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20 changes: 19 additions & 1 deletion DG500_M7.hoc
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Original file line number Diff line number Diff line change
Expand Up @@ -998,26 +998,33 @@ ropen("/proc/uptime") // get a seed that is changing based on the processing t
}
//************************************ GC ***********************************************
rdgc2bc = new Random(rseed) // use for syn.connections
rdgc2bc.Random123()
proc new_rdgc2bc() {rdgc2bc.discunif(-1,1)} // range is based on spread of connections on either side of RING- precell loc =0
new_rdgc2bc()
rdgc2mc = new Random(rseed) // use for syn.connections
rdgc2mc.Random123()
proc new_rdgc2mc() {rdgc2mc.discunif(0,2)}
new_rdgc2mc()
rdgc2hc = new Random(rseed) // use for syn.connections
rdgc2hc.Random123()
proc new_rdgc2hc() {rdgc2hc.discunif(-2 , 2)}
new_rdgc2hc()
rdgc2gc = new Random(rseed) // use for syn.connections
rdgc2gc.Random123()
proc new_rdgc2gc() {rdgc2gc.discunif(-50, 50)}
new_rdgc2gc()

//************************************ BC ***********************************************
rdbc2gc = new Random(rseed) // use for syn.connections
rdbc2gc.Random123()
proc new_rdbc2gc() {rdbc2gc.discunif(-70, 70)} // range is based on spread of connections on either side of RING- precell loc =0
new_rdbc2gc()
rdbc2bc = new Random(rseed) // use for syn.connections
rdbc2bc.Random123()
proc new_rdbc2bc() {rdbc2bc.discunif(-1, 1)}
new_rdbc2bc()
rdbc2mc = new Random(rseed) // use for syn.connections
rdbc2mc.Random123()
proc new_rdbc2mc() {rdbc2mc.discunif(-3, 3)}
new_rdbc2mc()

Expand All @@ -1035,42 +1042,53 @@ new_rdbc2mc()
//}

rdmc2gc1 = new Random(rseed) // use for syn.connections
rdmc2gc1.Random123()
proc new_rdmc2gc1() {rdmc2gc1.discunif(25, 175)} // range is based on spread of connections on either side of RING- precell loc =0
new_rdmc2gc1()
rdmc2gc2 = new Random(rseed) // use for syn.connections
rdmc2gc2.Random123()
proc new_rdmc2gc2() {rdmc2gc2.discunif(-175, -25)}
new_rdmc2gc2()
rdmc2bc = new Random(rseed) // use for syn.connections
rdmc2bc.Random123()
proc new_rdmc2bc() {rdmc2bc.discunif(-3,3)}
new_rdmc2bc()
rdmc2mc = new Random(rseed) // use for syn.connections
rdmc2mc.Random123()
proc new_rdmc2mc() {rdmc2mc.discunif(ngcell+nbcell, ngcell+nbcell+nmcell-1)}
new_rdmc2mc()
rdmc2mc1 = new Random(rseed) // use for syn.connections
rdmc2mc1.Random123()
proc new_rdmc2mc1() {rdmc2mc1.discunif(-3, 3)}
new_rdmc2mc1()
rdmc2hc = new Random(rseed) // use for syn.connections
rdmc2hc.Random123()
proc new_rdmc2hc() {rdmc2hc.discunif(-2, 2)}
new_rdmc2hc()
//************************************* HC ********************************************

rdhc2gc = new Random(rseed) // use for syn.connections
rdhc2gc.Random123()
proc new_rdhc2gc() {rdhc2gc.discunif(-130, 130)}
new_rdhc2gc()
rdhc2bc = new Random(rseed) // use for syn.connections
rdhc2bc.Random123()
proc new_rdhc2bc() {rdhc2bc.discunif(-2, 2)}
new_rdhc2bc()
rdhc2mc = new Random(rseed) // use for syn.connections
rdhc2mc.Random123()
proc new_rdhc2mc() {rdhc2mc.discunif(-2, 2)}
new_rdhc2mc()

//**************** randomizer for the dendritic location of synapse **************************************

rdsyna = new Random(rseed) // initialize random distr.
rdsyna.Random123()
proc new_rdsyna() {rdsyna.discunif(0, 1)} // randomize among 2 dendrites
new_rdsyna()

rdsynb = new Random(rseed) // initialize random distr.
rdsynb.Random123()
proc new_rdsynb() {rdsynb.discunif(0, 3)} // randomize among 4 dendrites
new_rdsynb()

Expand Down Expand Up @@ -1614,4 +1632,4 @@ plotAP()

objectvar scene_vector_[1]
{doNotify()}
//quit()
//quit()
18 changes: 18 additions & 0 deletions RI10sp.hoc
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Original file line number Diff line number Diff line change
Expand Up @@ -1029,67 +1029,85 @@ ropen("/proc/uptime") // get a seed that is changing based on the processing t
}
//************************************GC***********************************************
rdgc2bc = new Random(rseed) // use for syn.connections
rdgc2bc.Random123()
proc new_rdgc2bc() {rdgc2bc.discunif(-1,1)}
new_rdgc2bc()
rdgc2mc = new Random(rseed) // use for syn.connections
rdgc2mc.Random123()
proc new_rdgc2mc() {rdgc2mc.discunif(0,2)}
new_rdgc2mc()
rdgc2hc = new Random(rseed) // use for syn.connections
rdgc2hc.Random123()
proc new_rdgc2hc() {rdgc2hc.discunif(-2 , 2)}
new_rdgc2hc()
rdgc2gc = new Random(rseed) // use for syn.connections
rdgc2gc.Random123()
proc new_rdgc2gc() {rdgc2gc.discunif(-50, 50)}
new_rdgc2gc()

//************************************BC***********************************************
rdbc2gc = new Random(rseed) // use for syn.connections
rdbc2gc.Random123()
proc new_rdbc2gc() {rdbc2gc.discunif(0, ngcell-1)}
new_rdbc2gc()
rdbc2bc = new Random(rseed) // use for syn.connections
rdbc2bc.Random123()
proc new_rdbc2bc() {rdbc2bc.discunif(ngcell, ngcell+nbcell-1)}
new_rdbc2bc()
rdbc2mc = new Random(rseed) // use for syn.connections
rdbc2mc.Random123()
proc new_rdbc2mc() {rdbc2mc.discunif(ngcell+nbcell, ngcell+nbcell+nmcell-1)}
new_rdbc2mc()

//*************************************MC********************************************
rdmc2gc1 = new Random(rseed) // use for syn.connections
rdmc2gc1.Random123()
proc new_rdmc2gc1() {rdmc2gc1.discunif(25, 175)}
new_rdmc2gc1()
rdmc2gc2 = new Random(rseed) // use for syn.connections
rdmc2gc2.Random123()
proc new_rdmc2gc2() {rdmc2gc2.discunif(-175, -25)}
new_rdmc2gc2()
rdmc2bc = new Random(rseed) // use for syn.connections
rdmc2bc.Random123()
proc new_rdmc2bc() {rdmc2bc.discunif(-3,3)}
new_rdmc2bc()
rdmc2mc = new Random(rseed) // use for syn.connections
rdmc2mc.Random123()
proc new_rdmc2mc() {rdmc2mc.discunif(ngcell+nbcell, ngcell+nbcell+nmcell-1)}
new_rdmc2mc()
rdmc2mc1 = new Random(rseed) // use for syn.connections
rdmc2mc1.Random123()
proc new_rdmc2mc1() {rdmc2mc1.discunif(-3, 3)}
new_rdmc2mc1()
rdmc2hc = new Random(rseed) // use for syn.connections
rdmc2hc.Random123()
proc new_rdmc2hc() {rdmc2hc.discunif(-2, 2)}
new_rdmc2hc()
//*************************************HC********************************************

rdhc2gc = new Random(rseed) // use for syn.connections
rdhc2gc.Random123()
proc new_rdhc2gc() {rdhc2gc.discunif(0, ngcell-1)}
new_rdhc2gc()
rdhc2bc = new Random(rseed) // use for syn.connections
rdhc2bc.Random123()
proc new_rdhc2bc() {rdhc2bc.discunif(ngcell, ngcell+nbcell-1)}
new_rdhc2bc()
rdhc2mc = new Random(rseed) // use for syn.connections
rdhc2mc.Random123()
proc new_rdhc2mc() {rdhc2mc.discunif(ngcell+nbcell, ngcell+nbcell+nmcell-1)}
new_rdhc2mc()

//*********************************************************************************

rdsyna = new Random(rseed) // initialize random distr.
rdsyna.Random123()
proc new_rdsyna() {rdsyna.discunif(0, 1)}
new_rdsyna()

rdsynb = new Random(rseed) // initialize random distr.
rdsynb.Random123()
proc new_rdsynb() {rdsynb.discunif(0, 3)}
new_rdsynb()

Expand Down
1 change: 1 addition & 0 deletions readme.html
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Original file line number Diff line number Diff line change
Expand Up @@ -67,6 +67,7 @@
2022-05: Updated MOD files to contain valid C++ and be compatible with
the upcoming versions 8.2 and 9.0 of NEURON.
2022-12: Fix 9.0.0 Upcoming error: new_seed used as both variable and function in file Gfluct.mod
2024-11: Updated hoc files to use Random123
</pre>

</html>
18 changes: 18 additions & 0 deletions testnet.hoc
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Original file line number Diff line number Diff line change
Expand Up @@ -1040,67 +1040,85 @@ ropen("/proc/uptime") // get a seed that is changing based on the processing t
}
//************************************GC***********************************************
rdgc2bc = new Random(rseed) // use for syn.connections
rdgc2bc.Random123()
proc new_rdgc2bc() {rdgc2bc.discunif(0,1)}
new_rdgc2bc()
rdgc2mc = new Random(rseed) // use for syn.connections
rdgc2mc.Random123()
proc new_rdgc2mc() {rdgc2mc.discunif(0,1)}
new_rdgc2mc()
rdgc2hc = new Random(rseed) // use for syn.connections
rdgc2hc.Random123()
proc new_rdgc2hc() {rdgc2hc.discunif(0 , 1)}
new_rdgc2hc()
rdgc2gc = new Random(rseed) // use for syn.connections
rdgc2gc.Random123()
proc new_rdgc2gc() {rdgc2gc.discunif(0, 1)}
new_rdgc2gc()

//************************************BC***********************************************
rdbc2gc = new Random(rseed) // use for syn.connections
rdbc2gc.Random123()
proc new_rdbc2gc() {rdbc2gc.discunif(0, 1)}
new_rdbc2gc()
rdbc2bc = new Random(rseed) // use for syn.connections
rdbc2bc.Random123()
proc new_rdbc2bc() {rdbc2bc.discunif(0, 1)}
new_rdbc2bc()
rdbc2mc = new Random(rseed) // use for syn.connections
rdbc2mc.Random123()
proc new_rdbc2mc() {rdbc2mc.discunif(0, 1)}
new_rdbc2mc()

//*************************************MC********************************************
rdmc2gc1 = new Random(rseed) // use for syn.connections
rdmc2gc1.Random123()
proc new_rdmc2gc1() {rdmc2gc1.discunif(0,1)}
new_rdmc2gc1()
rdmc2gc2 = new Random(rseed) // use for syn.connections
rdmc2gc2.Random123()
proc new_rdmc2gc2() {rdmc2gc2.discunif(0,0)}
new_rdmc2gc2()
rdmc2bc = new Random(rseed) // use for syn.connections
rdmc2bc.Random123()
proc new_rdmc2bc() {rdmc2bc.discunif(0,0)}
new_rdmc2bc()
rdmc2mc = new Random(rseed) // use for syn.connections
rdmc2mc.Random123()
proc new_rdmc2mc() {rdmc2mc.discunif(0, 1)}
new_rdmc2mc()
rdmc2mc1 = new Random(rseed) // use for syn.connections
rdmc2mc1.Random123()
proc new_rdmc2mc1() {rdmc2mc1.discunif(0, 1)}
new_rdmc2mc1()
rdmc2hc = new Random(rseed) // use for syn.connections
rdmc2hc.Random123()
proc new_rdmc2hc() {rdmc2hc.discunif(0, 1)}
new_rdmc2hc()
//*************************************HC********************************************

rdhc2gc = new Random(rseed) // use for syn.connections
rdhc2gc.Random123()
proc new_rdhc2gc() {rdhc2gc.discunif(0, 1)}
new_rdhc2gc()
rdhc2bc = new Random(rseed) // use for syn.connections
rdhc2bc.Random123()
proc new_rdhc2bc() {rdhc2bc.discunif(0, 1)}
new_rdhc2bc()
rdhc2mc = new Random(rseed) // use for syn.connections
rdhc2mc.Random123()
proc new_rdhc2mc() {rdhc2mc.discunif(0,1)}
new_rdhc2mc()

//*********************************************************************************

rdsyna = new Random(rseed) // initialize random distr.
rdsyna.Random123()
proc new_rdsyna() {rdsyna.discunif(0, 1)}
new_rdsyna()

rdsynb = new Random(rseed) // initialize random distr.
rdsynb.Random123()
proc new_rdsynb() {rdsynb.discunif(0, 1)}
new_rdsynb()

Expand Down