.travis.yml

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# regarding copyright ownership.

# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
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#     http://www.apache.org/licenses/LICENSE-2.0

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language: python

os: linux

python:
    - "2.7"
    - "3.6"

env:
    matrix:
        - TESTENV=docs
        - TESTENV=code
        - TESTENV=pylint

before_install:
    - pwd
    - ls /usr/lib/
    - mkdir -p ${HOME}/bin
    - mkdir -p ${HOME}/lib
    - mkdir -p ${HOME}/code

# command to install dependencies
install:
    - pip install -e .
    - pip install -r requirements.txt
    - if [[ "$TESTENV" == "docs" ]]; then pip install sphinx;fi
    - if [[ "$TESTENV" == "pylint" ]]; then pip install pylint;fi

    # UCSC Tools
    - cd ${HOME}/lib
    - wget http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedToBigBed
    - wget http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wigToBigWig

before_script:
    - cd ${HOME}/lib
    - chmod +x bedToBigBed
    - chmod +x wigToBigWig

    - cd ${HOME}/bin

    - ln -s ${HOME}/lib/bedToBigBed bedToBigBed
    - ln -s ${HOME}/lib/wigToBigWig wigToBigWig

    - export PATH="$PWD:$PATH"

    - cd ${HOME}/build/Multiscale-Genomics/mg-dm-api

    - sudo chmod +x scripts/travis/docs_harness.sh
    - sudo chmod +x scripts/travis/pylint_harness.sh

# command to run tests
script:
    - if [[ "$TESTENV" == "code" ]]; then pytest; fi
    - if [[ "$TESTENV" == "docs" ]]; then ./scripts/travis/docs_harness.sh; fi
    - if [[ "$TESTENV" == "pylint" ]]; then ./scripts/travis/pylint_harness.sh; fi