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major refactor of TRAPI and summarization code #231
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Commits on May 8, 2024
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cleanup summary edge abstraction; other minor cleanups/comments
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Commits on May 15, 2024
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cleanup and begin splitting up trapi.mjs
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Merge branch 'develop' into refactor/trapi-cleanup
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Commits on May 17, 2024
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refactor TRAPI query graph generation
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Commits on May 19, 2024
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add TRAPI loading into QGraph elements
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Commits on May 21, 2024
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fix bug when merging publications
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add qualified predicate to MVP2 query
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Commits on May 22, 2024
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Commits on May 23, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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convert summary metadata to class
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Commits on May 24, 2024
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simplify the number of extraction rule helpers
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Commits on May 29, 2024
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changes to attribute gathering for clarity
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Commits on May 30, 2024
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finish cleaning up attribute extraction code
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Commits on May 31, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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Commits on Jun 11, 2024
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Commits on Jun 13, 2024
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change name of summarization lib
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catch branch up with main (manual merge)
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Commits on Jun 14, 2024
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add TRAPI helpers for getting code kedge properties
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add binding -> graph element helpers in TRAPI library
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add comments for getting result endpoints
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Commits on Jun 15, 2024
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add qualifier and support graph helpers
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cleanup qualified predicate generation
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Commits on Jun 17, 2024
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fix bug that caused support paths not to be generated
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Commits on Jun 18, 2024
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better naming for qualified predicate generation
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Commits on Jun 19, 2024
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Commits on Jun 20, 2024
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fix bug in tagging attributes introduced in refactor
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Commits on Jul 4, 2024
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merge develop with refactor; fix regression test structure
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Commits on Jul 8, 2024
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doc updates; get rid of uneeded getter function
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refactor summary edges and dependant code
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Commits on Jul 12, 2024
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update to develop; fix regression testing
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Commits on Jul 19, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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Throw an explicit error when a message is missing a QG
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Shorten variable names for summary and fragment
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Change naming for tag functions for consistency
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Move helpers to trapi.mjs; Rename ids for clarity
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Shorten names to increase readability
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Move Summary classes; Shorten names for clarity
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Add utility functions; Rename for clarity
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Commits on Jul 20, 2024
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Commits on Jul 22, 2024
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resolve equal summary paths in pidSort
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Fix bug with result tag gathering
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Commits on Jul 23, 2024
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Fix multiple bugs found in regression testing
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Commits on Jul 24, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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fix merge conflicts with test/regression
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Commits on Jul 25, 2024
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fix biothings curie annotation gathering
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Change regression configuration to be production config
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Commits on Jul 29, 2024
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fix bugs with BTA attribuate process
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Commits on Jul 30, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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Merge branch 'develop' into refactor/trapi-cleanup
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Commits on Jul 31, 2024
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Merge branch 'develop' into refactor/trapi-cleanup
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Commits on Sep 19, 2024
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Commits on Sep 20, 2024
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finish tag restructuring merge
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Commits on Sep 23, 2024
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Add submission of pathfinder queries
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Finish merging pathfinder changes
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fix bug with wrong name for path id generation
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Commits on Sep 24, 2024
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add constraints to pathfinder query
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