oops

NIH-HPC · Aug 2, 2021 · a1ff2f6 · a1ff2f6
1 parent 85042a6
commit a1ff2f6
Showing 1 changed file with 7 additions and 7 deletions.
diff --git a/swarm.html b/swarm.html
@@ -747,13 +747,13 @@ <h3>Redirecting output</h3>
 <p>For example, in order to create a unique directory in allocated /lscratch for each subjob, this bash code example can be used:</p>
 
 <pre class="term">
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
-export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/hooverdm/GitHub/swarm/tests/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
+export TAG=${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID} &amp;&amp; mkdir /lscratch/${SLURM_JOB_ID}/${TAG} &amp;&amp; touch /lscratch/${SLURM_JOB_ID}/${TAG}/foo.{0..4} &amp;&amp; tar czf /data/user/${TAG}.tgz /lscratch/${SLURM_JOB_ID}/${TAG}/foo.*
 </pre>
 
 <p>In this case, while the files created within each distinct<b><tt>/lscratch/${SLURM_JOB_ID}/${SLURM_ARRAY_JOB_ID}_${SLURM_ARRAY_TASK_ID}_${SWARM_PROC_ID}</tt></b> directory are identical to all