Merge branch 'release/0.4.0' into master

.github/stale.yml

@@ -0,0 +1,17 @@
+# Number of days of inactivity before an issue becomes stale
+daysUntilStale: 300
+# Number of days of inactivity before a stale issue is closed
+daysUntilClose: 65
+# Issues with these labels will never be considered stale
+exemptLabels:
+  - pinned
+  - security
+# Label to use when marking an issue as stale
+staleLabel: wontfix
+# Comment to post when marking an issue as stale. Set to `false` to disable
+markComment: >
+  This issue has been automatically marked as stale because it has not had
+  recent activity. It will be closed if no further activity occurs. Thank you
+  for your contributions.
+# Comment to post when closing a stale issue. Set to `false` to disable
+closeComment: false

.github/workflows/benchmarks.yml

@@ -16,11 +16,11 @@ jobs:
   APFEL:
     runs-on: ubuntu-latest
     strategy:
-#      max-parallel: 2
+      max-parallel: 2
       matrix:
-        python-version: [3.8]
+        python-version: [3.8, 3.9]
       fail-fast: false
-            
+
     steps:
       - name: Configure git-lfs to ignore most files
         run: |
@@ -48,7 +48,7 @@ jobs:
       - name: Test yadism
         run: |
           # run tests
-          pytest -m commit_check benchmarks/benchmark_against_apfel.py
+          pytest -m commit_check benchmarks/runners/benchmark_against_*.py
       - name: Upload coverage to Codecov
         uses: codecov/codecov-action@v1
         with:

.github/workflows/pub_docs.yml

@@ -4,28 +4,35 @@ on:
   push:
     branches:
       - master
+      - develop
+    tags:
+      - "*"
 
 jobs:
   deploy-ghpages:
     runs-on: ubuntu-latest
     strategy:
-#      max-parallel: 2
+      #max-parallel: 3
       matrix:
-        python-version: [3.7]
+        python-version: [3.8]
       fail-fast: false
 
     steps:
       - name: Checkout 🛎️
         uses: actions/checkout@v2
         with:
           persist-credentials: false
-          token: ${{ secrets.ALE_DIS_PAT }}
+          token: ${{ github.token }}
           submodules: "true"
+      - name: Set up Node 🧶
+        uses: actions/setup-node@v2-beta
+        with:
+          node-version: "12"
       - name: Set up Python ${{ matrix.python-version }} 🐍
         uses: actions/setup-python@v1
         with:
           python-version: ${{ matrix.python-version }}
-      - name: Install package and build docs 📦
+      - name: Install package 📦
         run: |
           # install pip
           python -m pip install --upgrade pip
@@ -35,11 +42,42 @@ jobs:
         run: |
           pip install -r doc_requirements.txt
           sudo apt-get install graphviz
-          cd docs/sphinx/
+          cd docs/home-page
+          yarn
+          make
+          cd ../sphinx/
           make html
+      - name: Save files 💾
+        run: |
+          cd docs
+          mv sphinx/build/html ~
+          mv home-page/build ~/home-page
+          mv _assets ~
+      - name: Prepare deployment ⌛
+        run: |
+          # fetch all branches
+          git fetch --depth=1
+          git checkout gh-pages
+          github_ref="${{ github.ref }}"
+          dest_dir=$(echo $github_ref | rev | cut -d "/" -f 1 | rev)
+          if [ "$dest_dir" = "master" ]; then
+            dest_dir="stable"
+          fi
+          rm -rf js
+          mv ~/home-page/* .
+          rm -rf _assets
+          mv ~/_assets .
+          rm -rf $dest_dir
+          mv ~/html $dest_dir
       - name: Deploy 🚀
-        uses: JamesIves/github-pages-deploy-action@releases/v3
+        #uses: JamesIves/github-pages-deploy-action@releases/v3
+        #with:
+        #ACCESS_TOKEN: ${{ github.token }}
+        #BRANCH: gh-pages # The branch the action should deploy to.
+        #FOLDER: "docs/sphinx/build/html" # The folder the action should deploy.
+        uses: EndBug/add-and-commit@v4.4.0
         with:
-          ACCESS_TOKEN: ${{ secrets.ALE_DIS_PAT }}
-          BRANCH: gh-pages # The branch the action should deploy to.
-          FOLDER: "docs/sphinx/build/html" # The folder the action should deploy.
+          message: "Currently deploying: ${{ github.ref }}"
+          ref: "gh-pages"
+        env:
+          GITHUB_TOKEN: ${{ github.token }}

.github/workflows/pypi.yml

@@ -0,0 +1,37 @@
+name: deploy
+
+on:
+  push:
+    tags:
+      - "*"
+
+jobs:
+  build-n-publish:
+    name: Build and publish Python 🐍 distributions 📦 to PyPI
+
+    strategy:
+      matrix:
+        os: [ubuntu-latest]
+        python-version: [3.8]
+
+    #if: startsWith(github.event.ref, 'refs/tags')
+
+    runs-on: ${{ matrix.os }}
+
+    steps:
+      - uses: actions/checkout@master
+      - name: Setup Python 🐍
+        uses: actions/setup-python@master
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install package
+        run: |
+          pip install -e .
+      - name: Package the distribution
+        run: |
+          # package the pure python wheel
+          pip wheel . -w dist --no-deps
+      - name: Publish distribution 📦 to PyPI
+        uses: pypa/gh-action-pypi-publish@master
+        with:
+          password: ${{ secrets.PYPI_TOKEN }}

.github/workflows/regression.yml

@@ -9,9 +9,9 @@ jobs:
   regression:
     runs-on: ubuntu-latest
     strategy:
-#      max-parallel: 2
+      max-parallel: 3
       matrix:
-        python-version: [3.7, 3.8]
+        python-version: [3.7, 3.8, 3.9]
       fail-fast: false
 
     steps:

.github/workflows/unittests.yml

@@ -9,14 +9,17 @@ jobs:
   unittests:
     runs-on: ubuntu-latest
     strategy:
-#      max-parallel: 2
+      max-parallel: 3
       matrix:
-        python-version: [3.7, 3.8]
+        python-version: [3.7, 3.8, 3.9]
       fail-fast: false
-    
+
     steps:
       # checkout the repo on the github runner
+      # with fetch-depth = 0 all the repo is checked out with full-history
       - uses: actions/checkout@v2
+        with:
+          fetch-depth: 0
       - name: Set up Python ${{ matrix.python-version }} 🐍
         uses: actions/setup-python@v1
         with:

.gitignore

@@ -1,3 +1,6 @@
+# ignore version
+src/yadism/version.py
+
 # Byte-compiled / optimized / DLL files
 __pycache__/
 *.py[cod]

.pylintrc

@@ -3,7 +3,7 @@
 # A comma-separated list of package or module names from where C extensions may
 # be loaded. Extensions are loading into the active Python interpreter and may
 # run arbitrary code
-extension-pkg-whitelist=numpy
+extension-pkg-whitelist=numpy,lhapdf,QCDNUM,scipy.special,rich
 
 # Add files or directories to the blacklist. They should be base names, not
 # paths.

README.md

@@ -1,5 +1,5 @@
 <p align="center">
-  <a href="https://n3pdf.github.io/yadism/"><img alt="Yadism" src="docs/logo/logo.png" width=600></a>
+  <a href="https://n3pdf.github.io/yadism/"><img alt="Yadism" src="docs/_assets/logo/logo.png" width=600></a>
 </p>
 
 <p align="center">