relative path to pngs

utils/soca/fig_gallery/index_vrfy_marine.html.j2

@@ -489,7 +489,7 @@ window.onclick = function(event) {
             var month = document.getElementById('inputMonth').value;
             var day = document.getElementById('inputDay').value;
             var hour = document.getElementById('inputHour').value;
-            var inputPath = "{{ path_to_vrfy }}/gdas."+year+month+day+"."+hour+"/vrfy/";
+            var inputPath = "./gdas."+year+month+day+"."+hour+"/vrfy/";
 
             var woaTEMPpath = "/scratch1/NCEPDEV/da/Mindo.Choi/sandbox/marine_vrfy/comparison/WOA23/bkg/Temp/images/"+year+month+"/";
             var ostiaSEAICEpath = "/scratch1/NCEPDEV/da/Mindo.Choi/sandbox/marine_vrfy/comparison/OSTIA/"

utils/soca/fig_gallery/run_vrfy.py

@@ -71,8 +71,10 @@ def generate_jobcard(template_path, output_path, context):
     config = yaml.safe_load(template.render(pslot=template_dict["pslot"]))
 
     # Iterate over the date range
+    pdys = []
     for pdy in iterate_pdy_range(config['start_pdy'], config['end_pdy']):
         context = copy.deepcopy(config)
+        pdys.append(pdy)
         for cyc in config["cycs"]:
           # Update the cycle's date
           context.update({"pdy": pdy, "cyc": cyc})
@@ -85,8 +87,23 @@ def generate_jobcard(template_path, output_path, context):
           # Submit the plotting job
           subprocess.run(f"sbatch {jobcard}", shell=True)
 
+    # Create the list of years, months, and days from pdys
+    pdys = sorted(pdys)
+    years = list(set([pdy[:4] for pdy in pdys]))
+    months = list(set([pdy[4:6] for pdy in pdys]))
+    days = list(set([pdy[6:] for pdy in pdys]))
+
+    # make sure the elements of years, months, and days are unique
+    years = list(set(years))
+    months = list(set(months))
+    days = list(set(days))
+
+    # sort the years, months, and days
+    years.sort()
+    months.sort()
+    days.sort()
+
     # Create the HTML document
-    # copy the HTML resource files from marine_vrfy_display to the output directory
     srcdir = os.path.join(context['homegdas'], 'utils', 'soca', 'fig_gallery', 'marine_vrfy_display')
     dstdir = context['vrfyout']
     os.makedirs(dstdir, exist_ok=True)
@@ -95,13 +112,11 @@ def generate_jobcard(template_path, output_path, context):
     output_html = os.path.join(dstdir, 'index.html')
 
     # define the html context
-    # TODO(G): get lsts from the list of cycles
     html_context = {
-        'year_list': ["2021"],
-        'month_list': ["07"],
-        'day_list': ["01", "02", "03", "04", "05", "06", "07", "08"],
-        'pslot': "cp4.01",
-        'path_to_vrfy': context['vrfyout']
+        'year_list': years,
+        'month_list': months,
+        'day_list': days,
+        'pslot': template_dict["pslot"],
     }
 
     # render the html

utils/soca/fig_gallery/vrfy_config.yaml

@@ -1,15 +1,15 @@
 pslot: "nomlb"
 start_pdy: '20210701'
-end_pdy: '20210701'
-cycs: ["00"] #, "06", "12", "18"]
+end_pdy: '20210708'
+cycs: ["00", "06", "12", "18"]
 run: "gdas"
 homegdas: "/work2/noaa/da/gvernier/runs/mlb/GDASApp"
 base_exp_path: "/work2/noaa/da/gvernier/runs/mlb/{{ pslot }}/COMROOT/{{ pslot }}"
 vrfyout: "/work2/noaa/da/gvernier/runs/mlb/test-verif/{{ pslot }}"
 plot_ensemble_b: "OFF"
 plot_parametric_b: "OFF"
 plot_background: "OFF"
-plot_increment: "ON"
+plot_increment: "OFF"
 plot_analysis: "OFF"
 eva_plots: "OFF"
 qos: "batch"

utils/soca/fig_gallery/vrfy_jobcard.sh.j2

@@ -34,13 +34,13 @@ export PLOT_INCREMENT={{ plot_increment | default("ON") }}
 export PLOT_ANALYSIS={{ plot_analysis | default("OFF") }}
 export PLOT_ANALYSIS={{ plot_analysis | default("OFF") }}
 export EVA_PLOTS={{ eva_plots | default("OFF") }}
-export VRFYOUT="{{ vrfyout | default("./vrfyout") }}"
 
 # Define and export the environment variables
 export cyc="{{ cyc }}"
 export RUN="{{ run | default("gdas") }}"
 export PSLOT="{{ pslot }}"
 export PDY="{{ pdy }}"
+export VRFYOUT="{{ vrfyout | default("./vrfyout") }}"/${RUN}.${PDY}.${cyc}
 
 # Define base experiment path
 BASE_EXP_PATH="{{ base_exp_path }}"  # path to the gdas.pdy directory