remove evaluate_lpdf

NOAA-FIMS · Aug 1, 2024 · 17eb407 · 17eb407
1 parent b04f6db
commit 17eb407
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Showing 2 changed files with 1 addition and 15 deletions.
diff --git a/inst/include/interface/rcpp/rcpp_interface.hpp b/inst/include/interface/rcpp/rcpp_interface.hpp
@@ -374,8 +374,7 @@ RCPP_MODULE(fims) {
       .method("get_id", &BevertonHoltRecruitmentInterface::get_id)
       .field("log_sigma_recruit",
              &BevertonHoltRecruitmentInterface::log_sigma_recruit)
-      .method("evaluate", &BevertonHoltRecruitmentInterface::evaluate)
-      .method("evaluate_lpdf", &BevertonHoltRecruitmentInterface::evaluate_lpdf);
+      .method("evaluate", &BevertonHoltRecruitmentInterface::evaluate);
 
   Rcpp::class_<FleetInterface>("Fleet")
       .constructor()

diff --git a/inst/include/interface/rcpp/rcpp_objects/rcpp_recruitment.hpp b/inst/include/interface/rcpp/rcpp_objects/rcpp_recruitment.hpp
@@ -98,19 +98,6 @@ class BevertonHoltRecruitmentInterface : public RecruitmentInterfaceBase {
     return BevHolt.evaluate(spawners, ssbzero);
   }
 
-  virtual double evaluate_lpdf() {
-    fims_popdy::SRBevertonHolt<double> LPDF;
-    LPDF.log_sigma_recruit.resize(1);
-    LPDF.log_sigma_recruit[0] = this->log_sigma_recruit.value_m;
-    LPDF.log_recruit_devs.resize(log_devs.size());  // Vector from TMB
-    for (int i = 0; i < log_devs.size(); i++) {
-      LPDF.log_recruit_devs[i] = log_devs[i].value_m;
-    RECRUITMENT_LOG << "Log recruit devs being passed to C++ are " << log_devs[i].value_m
-                    << std::endl;
-    }
-    LPDF.estimate_log_recruit_devs = this->estimate_log_devs;
-    return LPDF.evaluate_lpdf();
-  }
 
 #ifdef TMB_MODEL