Update dependencies to resolve deprecation warnings #1711

Job	Run time
util_tests (3.8)	1m 53s
util_tests (3.9)	1m 42s
util_tests (3.10)	1m 53s
util_tests (3.11)	1m 53s
unit_tests (3.8)	2m 7s
util_tests (3.12)	2m 17s
unit_tests (3.9)	2m 12s
unit_tests (3.10)	2m 27s
unit_tests (3.11)	2m 8s
unit_tests (3.12)	2m 44s
py_build_tests / py_build_tests	6s
py_build_tests / relative_path_tests	10s
docker_build_tests / docker_build_tests	24m 4s
	45m 36s

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