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make plot_GSEA more compatible to gsea_result data frame generated by other means #108

make plot_GSEA more compatible to gsea_result data frame generated by other means

make plot_GSEA more compatible to gsea_result data frame generated by other means #108

Triggered via pull request February 3, 2025 20:15
Status Success
Total duration 5m 17s
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lint.yml

on: pull_request
Matrix: build
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10 warnings
build (4.3.1): R/data_manipulation.R#L3
file=R/data_manipulation.R,line=3,col=40,[brace_linter] There should be a space before an opening curly brace.
build (4.3.1): R/data_manipulation.R#L3
file=R/data_manipulation.R,line=3,col=40,[paren_body_linter] There should be a space between a right parenthesis and a body expression.
build (4.3.1): R/data_manipulation.R#L8
file=R/data_manipulation.R,line=8,col=53,[brace_linter] There should be a space before an opening curly brace.
build (4.3.1): R/data_manipulation.R#L8
file=R/data_manipulation.R,line=8,col=53,[paren_body_linter] There should be a space between a right parenthesis and a body expression.
build (4.3.1): R/data_manipulation.R#L9
file=R/data_manipulation.R,line=9,col=3,[object_usage_linter] no visible global function definition for 'assay'
build (4.3.1): R/data_manipulation.R#L9
file=R/data_manipulation.R,line=9,col=3,[object_usage_linter] no visible global function definition for 'assay<-'
build (4.3.1): R/data_manipulation.R#L9
file=R/data_manipulation.R,line=9,col=3,[object_usage_linter] no visible global function definition for 'assay'
build (4.3.1): R/data_manipulation.R#L9
file=R/data_manipulation.R,line=9,col=45,[object_usage_linter] no visible binding for global variable 'temp'
build (4.3.1): R/data_manipulation.R#L9
file=R/data_manipulation.R,line=9,col=61,[T_and_F_symbol_linter] Use TRUE instead of the symbol T.
build (4.3.1): R/DE.R#L2
file=R/DE.R,line=2,col=1,[cyclocomp_linter] Functions should have cyclomatic complexity of less than 15, this has 22.