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MaxQuant_trim function weirdness #1

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lincoln-harris opened this issue Apr 4, 2022 · 0 comments
Open

MaxQuant_trim function weirdness #1

lincoln-harris opened this issue Apr 4, 2022 · 0 comments
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lincoln-harris commented Apr 4, 2022

Why does invoking ms_imputer.utilities.maxquant_trim change the reconstructed matrix?

This doesn't make any sense. The arrays assigned to quants_matrix (L64) are identical, whether maxquant_trim is run or not. So why are the reconstructed matrices so different? What am I missing?

The maxquant_trim logic appears to be sound.

@lincoln-harris lincoln-harris added the bug Something isn't working label Apr 4, 2022
@lincoln-harris lincoln-harris self-assigned this Apr 4, 2022
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