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OATML-Markslab

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  1. ProteinGym ProteinGym Public

    Official repository for the ProteinGym benchmarks

    HTML 282 34

  2. EVE EVE Public

    Forked from OATML/EVE

    Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

    Python 167 37

  3. Tranception Tranception Public

    Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

    Python 147 24

  4. ProteinNPT ProteinNPT Public

    Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

    Python 105 10

  5. EVEscape EVEscape Public

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    Python 56 9

  6. proteingym_website proteingym_website Public

    JavaScript 1 1

Repositories

Showing 6 of 6 repositories
  • ProteinGym Public

    Official repository for the ProteinGym benchmarks

    OATML-Markslab/ProteinGym’s past year of commit activity
    HTML 282 MIT 34 9 0 Updated Mar 6, 2025
  • OATML-Markslab/proteingym_website’s past year of commit activity
    JavaScript 1 1 0 0 Updated Feb 7, 2025
  • ProteinNPT Public

    Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

    OATML-Markslab/ProteinNPT’s past year of commit activity
    Python 105 MIT 10 5 1 Updated Dec 23, 2024
  • EVE Public Forked from OATML/EVE

    Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

    OATML-Markslab/EVE’s past year of commit activity
    Python 167 MIT 57 0 3 Updated Mar 16, 2024
  • EVEscape Public

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    OATML-Markslab/EVEscape’s past year of commit activity
    Python 56 MIT 9 2 1 Updated Oct 11, 2023
  • Tranception Public

    Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

    OATML-Markslab/Tranception’s past year of commit activity
    Python 147 MIT 24 5 1 Updated Aug 24, 2023

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