add rSharp-based reusable workflows

.github/workflows/R-CMD-check-build.yaml

@@ -0,0 +1,68 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+
+on:
+  workflow_call:
+
+name: R-CMD-check
+
+permissions: read-all
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: windows-latest, r: 'release'}
+          - {os: ubuntu-latest,   r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::rcmdcheck
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+          build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
+          error-on: 'c("error")'
+
+      - name: Build package
+        if: ${{ success() }}
+        run: |
+          output_dir <- file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "built_package")
+          dir.create(output_dir)
+          devtools::build(binary = TRUE, path = output_dir)
+        shell: Rscript {0}
+
+      - name: Get package package and R versions and store in environment
+        run: |
+          echo "PKG_VERSION=$(Rscript -e 'desc::desc_get_version()')" >> $GITHUB_ENV
+          echo "R_VERSION=$(Rscript -e 'cat(R.version$major, R.version$minor, sep = ".")')" >> $GITHUB_ENV
+        shell: bash
+
+      - name: Upload built package
+        if: ${{ success() }}
+        uses: actions/upload-artifact@v4
+        with:
+          name: ospsuite-v${{ env.PKG_VERSION }}-${{runner.os}}-r_${{ env.R_VERSION }}
+          path: ${{ runner.temp }}/built_package/*

.github/workflows/bump_dev_version_tag_branch.yaml

@@ -0,0 +1,64 @@
+# This reusable workflow will, if triggered by a merge:
+#  - Bump version if the current version is development (x.y.z.9000+)
+#  - Tag the target branch with version number
+name: bump-dev-version
+
+on:
+  workflow_call:
+    inputs:
+      app-id:
+        type: string
+        required: true
+    secrets:
+      private-key:
+          required: true
+
+jobs:
+  bump-dev-version:
+    if: github.event_name != 'pull_request'
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions: write-all
+    steps:
+
+      - uses: actions/create-github-app-token@v1
+        id: app-token
+        with:
+          app-id: ${{ inputs.app-id }}
+          private-key: ${{ secrets.private-key }}
+
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+          token: ${{ steps.app-token.outputs.token }}
+
+      - name: Setup R
+        uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - name: Install packages
+        run: |
+          install.packages("usethis")
+        shell: Rscript {0}
+
+      - name: Change DESCRIPTION file
+        run: |
+          if(usethis:::is_dev_version()){
+            desc::desc_set_version(version = usethis:::bump_version()[["dev"]])
+          }
+        shell: Rscript {0}
+
+      - name: Get package version from DESCRIPTION file and set as environment variable
+        run: |
+            echo "PKG_VERSION=$(Rscript -e 'desc::desc_get_version()')" >> $GITHUB_ENV
+        shell: bash
+
+      - uses: EndBug/add-and-commit@v9
+        if: ${{ success() }}
+        with:
+          message: '🤖 Bump version. [skip actions]'
+          default_author: github_actions
+          add: 'DESCRIPTION'
+          tag: 'v${{ env.PKG_VERSION }}'

.github/workflows/pkgdown.yaml

@@ -0,0 +1,44 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+
+on:
+    workflow_call:
+
+name: pkgdown
+
+permissions: read-all
+
+jobs:
+  pkgdown:
+    runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::pkgdown, local::.
+          needs: website
+
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4.5.0
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs

.github/workflows/test-pkg-and-coverage.yml → .github/workflows/test-coverage-rClr.yml

@@ -18,10 +18,6 @@ on:
         default: '0.9.2'
       extra-packages:
         type: string
-    secrets:
-      CODECOV_TOKEN:
-        description: 'Token for codecov.io'
-        required: false
 
 name: test-pkg-and-coverage
 
@@ -52,8 +48,6 @@ jobs:
             install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
           )
         shell: Rscript {0}
-        env:
-          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
       - name: Show testthat output
         if: always()

.github/workflows/test-coverage.yaml

@@ -0,0 +1,58 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+
+on:
+    workflow_call:
+
+name: test-coverage
+
+permissions: read-all
+
+jobs:
+  test-coverage:
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::covr, any::xml2
+          needs: coverage
+
+      - name: Test coverage
+        run: |
+          cov <- covr::package_coverage(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
+          covr::to_cobertura(cov)
+        shell: Rscript {0}
+
+      - uses: codecov/codecov-action@v4
+        with:
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}
+
+      - name: Show testthat output
+        if: always()
+        run: |
+          ## --------------------------------------------------------------------
+          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
+        shell: bash
+
+      - name: Upload test results
+        if: failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-test-failures
+          path: ${{ runner.temp }}/package