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Added unit tests that only include nutrient modifications (no gene kos)#4

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djinnome wants to merge 40 commits intomainfrom
3-run-unit-tests-by-hand-on-final-algorithm
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Added unit tests that only include nutrient modifications (no gene kos)#4
djinnome wants to merge 40 commits intomainfrom
3-run-unit-tests-by-hand-on-final-algorithm

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@djinnome djinnome linked an issue Sep 27, 2023 that may be closed by this pull request
djinnome and others added 28 commits September 28, 2023 23:18
… the problem to be infeasible (because B is the limiting flux?)
…model does what we'd like. I need to swap the logic from the example model in "documentation", but it should be easy was we move the tests from the notebooks to the pytest runner.

If we modify the model from the generate_example_model.py file, it will be easy to modify and track its evolution as we add scenarios as the tests evolve.
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Run unit tests by hand on final algorithm

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