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Test flexible APIs only when PnetCDF-C >= 1.13.1 or mpi4py < 4.0.0 #24

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Aug 3, 2024
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Test flexible APIs only when PnetCDF-C >= 1.13.1 or mpi4py < 4.0.0 #24

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1e2c80b
Test flexible APIs only when PnetCDF-C >= 1.13.1 or mpi4py < 4.0.0
wkliao Aug 3, 2024
62b4d26
Github action: remove requirement of mpi4py 3.1.6
wkliao Aug 3, 2024
a123c82
Fix bash numerical value comparison
wkliao Aug 3, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/build_test_latest_c.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -57,7 +57,7 @@ jobs:
- name: Install python dependencies via pip
run: |
python -m pip install --upgrade pip
pip install numpy cython cftime pytest twine wheel check-manifest mpi4py==3.1.6
pip install numpy cython cftime pytest twine wheel check-manifest mpi4py

- name: Install pnetcdf
run: |
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30 changes: 28 additions & 2 deletions examples/test_all.sh
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Expand Up @@ -7,6 +7,28 @@
# Exit immediately if a command exits with a non-zero status.
set -e

MPI4PY_VERSION=`python -c "import mpi4py; print(mpi4py.__version__)"`
MPI4PY_VERSION_MAJOR=`echo ${MPI4PY_VERSION} | cut -d. -f1`
# echo "MPI4PY_VERSION=$MPI4PY_VERSION"
# echo "MPI4PY_VERSION_MAJOR=$MPI4PY_VERSION_MAJOR"

TEST_FLEXIBLE_API=no
if test "x$PNETCDF_DIR" != x ; then
PNETCDF_C_VERSION=`$PNETCDF_DIR/bin/pnetcdf-config --version | cut -d' ' -f2`
V_MAJOR=`echo ${PNETCDF_C_VERSION} | cut -d. -f1`
V_MINOR=`echo ${PNETCDF_C_VERSION} | cut -d. -f2`
V_SUB=`echo ${PNETCDF_C_VERSION} | cut -d. -f3`
VER_NUM=$((V_MAJOR*1000000 + V_MINOR*1000 + V_SUB))
if test $VER_NUM -gt 1013000 ; then
TEST_FLEXIBLE_API=yes
fi
fi

# test PnetCDF flexible APIs only when PnetCDF-C >= 1.13.1 or mpi4py < 4
if test $MPI4PY_VERSION_MAJOR -lt 4 ; then
TEST_FLEXIBLE_API=yes
fi

# Get the directory containing this script
if test "x$NPROC" = x ; then
NPROC=4
Expand All @@ -27,12 +49,11 @@ else
fi

echo ""
echo "---- Run programs wit $NPROC processes in folder 'examples' ---------------"
echo "---- Run programs with $NPROC processes in folder 'examples' --------------"

TETS_PROGS="collective_write.py
create_open.py
fill_mode.py
flexible_api.py
get_info.py
ghost_cell.py
global_attribute.py
Expand All @@ -45,6 +66,11 @@ TETS_PROGS="collective_write.py
put_vara.py
get_vara.py"

if test "x$TEST_FLEXIBLE_API" = xyes ; then
TETS_PROGS+=" flexible_api.py"
fi
# echo "TETS_PROGS=$TETS_PROGS"

for prog in $TETS_PROGS
do
# echo -n "---- Testing $prog with $NPROC MPI processes"
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