FIX: Fix Residual protocol for MCMC for Python 3.11

.github/workflows/tests.yaml

@@ -33,7 +33,7 @@ jobs:
       fail-fast: false
       max-parallel: 100
       matrix:
-        python-version: ["3.8", "3.9", "3.10"]
+        python-version: ["3.8", "3.9", "3.10", "3.11"]
     steps:
     - uses: actions/checkout@v2
       with:
@@ -52,7 +52,7 @@ jobs:
       fail-fast: false
       max-parallel: 100
       matrix:
-        python-version: ["3.8", "3.9", "3.10"]
+        python-version: ["3.8", "3.9", "3.10", "3.11"]
     steps:
     - uses: actions/checkout@v2
       with:

espei/error_functions/activity_error.py

@@ -190,7 +190,7 @@ def __init__(
         symbols_to_fit: Optional[List[SymbolName]] = None,
         weight: Optional[Dict[str, float]] = None,
         ):
-        super().__init__(database, datasets, phase_models, symbols_to_fit)
+        super().__init__(database, datasets, phase_models, symbols_to_fit, weight)
 
         if weight is not None:
             self.weight = weight.get("ACR", 1.0)

espei/error_functions/equilibrium_thermochemical_error.py

@@ -291,7 +291,7 @@ def __init__(
         symbols_to_fit: Optional[List[SymbolName]] = None,
         weight: Optional[Dict[str, float]] = None,
         ):
-        super().__init__(database, datasets, phase_models, symbols_to_fit)
+        super().__init__(database, datasets, phase_models, symbols_to_fit, weight)
 
         if weight is not None:
             self.weight = weight

espei/error_functions/non_equilibrium_thermochemical_error.py

@@ -332,7 +332,7 @@ def __init__(
         symbols_to_fit: Optional[List[SymbolName]] = None,
         weight: Optional[Dict[str, float]] = None,
         ):
-        super().__init__(database, datasets, phase_models, symbols_to_fit)
+        super().__init__(database, datasets, phase_models, symbols_to_fit, weight)
 
         if weight is not None:
             self.weight = weight

espei/error_functions/residual_base.py

@@ -50,8 +50,8 @@ def __init__(
         database: Database,
         datasets: PickleableTinyDB,
         phase_models: PhaseModelSpecification,
-        symbols_to_fit: Optional[List[SymbolName]],
-        weight: Optional[Dict[str, float]],
+        symbols_to_fit: Optional[List[SymbolName]] = None,
+        weight: Optional[Dict[str, float]] = None,
         ):
         ...
 

espei/error_functions/zpf_error.py

@@ -439,7 +439,7 @@ def __init__(
         symbols_to_fit: Optional[List[SymbolName]] = None,
         weight: Optional[Dict[str, float]] = None,
         ):
-        super().__init__(database, datasets, phase_models, symbols_to_fit)
+        super().__init__(database, datasets, phase_models, symbols_to_fit, weight)
         if weight is not None:
             self.weight = weight.get("ZPF", 1.0)
         else: