rphenofish

Table of contents

• Overview
• Features
• Installation
• Get started
• Documentation
• Citation
• Contributing
• Acknowledgments
• References

Overview

The goal of the R package rphenofish is to provide an interface to the PHENOFISH database. {{ ADD A FEW LINES }}

Features

The main purpose of the rphenofish package is to download, select, filter, homogenize, and visualize PHENOFISH data. The References page provides a full description of the features available in the package.

Installation

You can install the development version from GitHub with:

## Install < remotes > package (if not already installed) ----
if (!requireNamespace("remotes", quietly = TRUE)) {
  install.packages("remotes")
}

## Install dev version of < rphenofish > from GitHub ----
remotes::install_github("PhenoFish/rphenofish")

Then you can attach the package rphenofish:

library("rphenofish")

Get started

For an overview of the main features of rphenofish, please read the Get started vignette.

Documentation

rphenofish provides {{ XX }} vignettes to learn more about the package:

• the Get started vignette describes the core features of the package
• other vignettes will come soon

Citation

Please cite this package as:

Casajus N & Loiseau N (2024) rphenofish: An R client to access the PHENOFISH database. R package version 0.0.0.9000. URL: https://phenofish.github.io/rphenofish/.

Contributing

All types of contributions are encouraged and valued. For more information, check out our Contributor Guidelines.

Please note that the rphenofish project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

Acknowledgments

This package has been developed for the FRB-CESAB working group PHENOFISH that aims to pool data on the biodiversity, morphology, behaviour and ecophysiology of marine and freshwater fishes that have never before been brought together.

References

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